Hello, I am trying to cluster protein 3D structural motifs in some form of feature space. To do this, I need a 'similarity metric' of …

Hi, I have to calculate RMSD between two proteins in Rstudio from PDB but I am not sure if I am doing it right. Could …

I have two structure in PyMol, and each has one low-conserved loop that spans several residues between N-terminal conserved domain and C-terminal conserved domain. I …

Hi everyone, I am currently working on calculating the RMSD between different protein structures. On the one hand, I am using API in pymol (align) …

Can we get RMSD graphical representation for two proteins in pyMOL (educational version)? Actually I have to compare wild type of FGF23 and mutant FGF23. …

Hi, It is urgent...please, could you tell me when I can define a structural superposition between two protein structures significant? I am superposing those with …

Hi, I am doing some structural comparisons with the visualization program Chimera to see similarities within a dataset of proteins. I was wondering how I …

Hi everyone, I have an urgent need of a suggestion..have any of you ever used the metaserver Procksi for structural comparison?I am using that for …

Hi Can anybody give me details as to how we can compare DNA methylation and Histone modification data with each other. Particularly comparing Bisulfite sequencing …

<p>I have two peptides in PyMol, and each has one alpha helix that spans several residues. Is it possible to calculate the RMSD just between …