Dear all,
I need some help, I would like to plot data, where will be on x-axis 1 2 3 4 5 6 7 and on Y-axis will be for each chr13, chr18 and chr21 numbers. I could see attached table:
1 2 3 4 5 6 7
chr 13 0.06 1.05 0.1 -1 -1.1 1.5 0.5
chr 18 0.05 7.2 0.6 -0.4 -1.7 0.12 1.1
chr 21 -0.3 -0.59 -0.02 -0.7 1.9 -0.3 -0.9
where variables for chr 13 will be with mark x, for chr 18 with different mark and for chr 21 different mark (point in graph).
Thank you for you help
Filip
1 answer
Have you tried something? I think that searching a bit on google you'll find the solution to this task, and then, if you get stuck at some point, you can come back here and ask. You can use the basic plot package of R to do the graph (here you can see some examples: http://www.harding.edu/fmccown/r/) or you can try ggplot (but I think that is more difficult if you're beginner).
Log in to answer this question.
-
Looking for an Alternative of SELECTON/2.4 for my aligned data to calculate position wise KaKs valu…
written by Muhammad •
-
How to Extract Values for SNPs by each chromosome and position using --window
written by Raju •
-
How to calculate and visualized alpha and beta diversity from metagenome assembled genome data
written by Roland •
-
Problem with design for DESeq2
written by 5cantaloupe5 •
-
Reorder by genes, but plot x-axis as chromosomes
written by vrehaman •
-
CosmicCodingMuts.vcf.gz for hg38?
written by Tania
-
reading txt file
written by niutster
-
Counting summary info (count of reads and average GC) for segment with specific length
written by Korsocius
-
Incompatible contigs No overlapping contigs found.
written by manojkumarbioinfo
-
how to compare sets using python (dealing with PDB file)
written by Jason Lin •
