I am trying very hard to install somatic sniper on my mac. Its not working. Totally confused on how to build. There is a build-common directory. What do I do with cmake? The directions aren't working.
Unless you have Homebrew, MacPorts, or Xcode, it's going to be really difficult to do this on a Mac. You use those to set up the build dependencies, and then you can proceed with cloning and building the code as described here.
So, I'm trying to install joinx from https://github.com/genome/joinx I can't use git cause its not installed on the server and I don't have sudo privileges. …
Hello everyone, I am new at linux, but I deed to compute FPKM with eXpress (http://bio.math.berkeley.edu/eXpress/tutorial.html) So I tried to install it based on the …
<p>Hello everybody, I am currently trying to install somatic sniper 1.0.3 on ubuntu 10.4,I run the command below :</p> <p>sudo gmt install somatic-sniper1.0.3</p> <p>but there …
<p>Hello. I am trying to install somatic sniper on a linux cluster (CentOS), but I can't get past one build issue. (I've searched Biostar, Seqanswers, …
<p>I am trying to compile somatic sniper from source but run into compilation errors.</p> <p>I cloned the git repository yesterday</p> <pre>$ git clone --recursive git://github.com/genome/somatic-sniper.git</pre> …
Off note: Use VarScan2 somatic. It's from the same the group and it's much advanced.