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Cyriac Kandoth
Cyriac Kandoth
Role:
Moderator (
Reputation:
6,090 (Trusted)
Joined:
14.1 years ago
Last seen:
1 week ago
Location:
Los Angeles, CA, USA
Google Scholar:
TMyFs8IAAAAJ

I'm a technical leader with a passion for building reusable tools with reproducible results for people and their work.

Latest posts by user
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Answer: Answer: GATES: automated whole-exome sequencing analysis for somatic and germline varian
written by Cyriac Kandoth 609
3 votes
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Answer: Answer: Detecting somatic variants in non-tumor tissue without normals
written by Cyriac Kandoth 609
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Comment: Comment: vcf2maf cosmic annotation
written by Cyriac Kandoth 609
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Comment: Comment: Identify if variants are somatic or germline from VCF file
written by Cyriac Kandoth 609
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Answer: Answer: How to identify whether the sample is from only one person and whether the sampl
written by Cyriac Kandoth 609
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Answer: Answer: Understanding VCF abbreviations
written by Cyriac Kandoth 609
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Comment: Comment: Best Hardware Solution For Medium-Size Bioinformatics Lab [15-20 Computers]
written by Cyriac Kandoth 609
5 votes
2 replies
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Answer: Answer: Best Hardware Solution For Medium-Size Bioinformatics Lab [15-20 Computers]
written by Cyriac Kandoth 609
0 votes
1 reply
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Comment: Comment: Base recalibration in normal vs. tumor somatic variant calling in WXS data?
written by Cyriac Kandoth 609
6 votes
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Answer: Answer: Base recalibration in normal vs. tumor somatic variant calling in WXS data?
written by Cyriac Kandoth 609
3 votes
1 reply
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Answer: Answer: Is it possible to detect of SNVs and InDels in low coverage WGS (5-10X) data?
written by Cyriac Kandoth 609
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Comment: Comment: Is it possible to detect of SNVs and InDels in low coverage WGS (5-10X) data?
written by Cyriac Kandoth 609
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2.3K views
Job: Bioinformatics Engineer, Molecular Diagnostics Labs, UCLA Health
scientist clinical variant bioinformatician engineer
written by Cyriac Kandoth 609
2 votes
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Comment: Comment: somatic short variant calling from patients having autoimmune disease
written by Cyriac Kandoth 609
1 vote
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Comment: Comment: TCGA Sample barcode
written by Cyriac Kandoth 609
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Comment: Comment: TCGA Sample barcode
written by Cyriac Kandoth 609
1 vote
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Comment: Comment: Good annotation databases for a VCF file (somatic variants)
written by Cyriac Kandoth 609
3 votes
1 reply
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Answer: Answer: Good annotation databases for a VCF file (somatic variants)
written by Cyriac Kandoth 609
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
written by Cyriac Kandoth 609
3 votes
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Answer: Answer: How to convert maf to vcf while retaining original mutation notations?
written by Cyriac Kandoth 609
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TODO: Awards