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Cyriac Kandoth
Cyriac Kandoth
Role:
Moderator
Reputation:
6,080
Joined:
14.0 years ago
Last seen:
1.7 years ago
Location:
Los Angeles, CA, USA
Google Scholar:
TMyFs8IAAAAJ
Twitter:
icyreaction

I'm an engineer who studies the pathogenesis of genetic diseases like cancer. My specialty is to learn what biologists/clinicians do for a living, and help them do more with automation and user-interfaces.

Latest posts by user
3 votes
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Answer: Answer: Detecting somatic variants in non-tumor tissue without normals
written by Cyriac Kandoth Cyriac Kandoth
0 votes
1 reply
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Comment: Comment: vcf2maf cosmic annotation
written by Cyriac Kandoth Cyriac Kandoth
0 votes
1 reply
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Comment: Comment: Identify if variants are somatic or germline from VCF file
written by Cyriac Kandoth Cyriac Kandoth
4 votes
0 replies
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Answer: Answer: How to identify whether the sample is from only one person and whether the sampl
written by Cyriac Kandoth Cyriac Kandoth
0 votes
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Answer: Answer: Understanding VCF abbreviations
written by Cyriac Kandoth Cyriac Kandoth
1 vote
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Comment: Comment: Best Hardware Solution For Medium-Size Bioinformatics Lab [15-20 Computers]
written by Cyriac Kandoth Cyriac Kandoth
5 votes
2 replies
0 views
Answer: Answer: Best Hardware Solution For Medium-Size Bioinformatics Lab [15-20 Computers]
written by Cyriac Kandoth Cyriac Kandoth
0 votes
1 reply
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Comment: Comment: Base recalibration in normal vs. tumor somatic variant calling in WXS data?
written by Cyriac Kandoth Cyriac Kandoth
6 votes
1 reply
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Answer: Answer: Base recalibration in normal vs. tumor somatic variant calling in WXS data?
written by Cyriac Kandoth Cyriac Kandoth
3 votes
1 reply
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Answer: Answer: Is it possible to detect of SNVs and InDels in low coverage WGS (5-10X) data?
written by Cyriac Kandoth Cyriac Kandoth
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Comment: Comment: Is it possible to detect of SNVs and InDels in low coverage WGS (5-10X) data?
written by Cyriac Kandoth Cyriac Kandoth
0 votes
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2.3K views
Job: Bioinformatics Engineer, Molecular Diagnostics Labs, UCLA Health
scientist clinical variant bioinformatician engineer
written by Cyriac Kandoth Cyriac Kandoth
2 votes
1 reply
0 views
Comment: Comment: somatic short variant calling from patients having autoimmune disease
written by Cyriac Kandoth Cyriac Kandoth
1 vote
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Comment: Comment: TCGA Sample barcode
written by Cyriac Kandoth Cyriac Kandoth
1 vote
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Comment: Comment: TCGA Sample barcode
written by Cyriac Kandoth Cyriac Kandoth
1 vote
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Comment: Comment: Good annotation databases for a VCF file (somatic variants)
written by Cyriac Kandoth Cyriac Kandoth
3 votes
1 reply
0 views
Answer: Answer: Good annotation databases for a VCF file (somatic variants)
written by Cyriac Kandoth Cyriac Kandoth
0 votes
0 replies
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Comment: Comment: Working with MAF files (Mutation Annotation Format) from the TCGA (The Cancer Ge
written by Cyriac Kandoth Cyriac Kandoth
3 votes
1 reply
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Answer: Answer: How to convert maf to vcf while retaining original mutation notations?
written by Cyriac Kandoth Cyriac Kandoth
1 vote
0 replies
1.3K views
Job: Positions at Molecular Diagnostics Labs, UCLA Health
variant clinical scientist curator molecular
written by Cyriac Kandoth Cyriac Kandoth
Latest awards to user
TODO: Awards