This is a test version of Biostars. For the public version, visit https://www.biostars.org.
Next Generation Sequence Analysis

Possible Duplicate:
What is the best pipeline for human whole exome sequencing?

Dear all,

I was just wondering to know what are the different steps involved for analysis of next generation sequencing data?

next-gen sequencing analysis
• 2,690 views • link
updated by Lars Juhl Jensen Lars Juhl Jensen • written by Unknown • Unknown

0 answers

No answers yet.

Log in to answer this question.

More posts like this
  • Domain Prediction In Globplot
    written by User 3325 User 3325
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/14516/domain-prediction-tool">domain prediction tool </a> </p> </blockquote> <p>is GLobPlot works for novel protein? can it predict domain of novel protein?</p>
  • Best Directory Tree To Organize Ngs Data On A Shared Server
    written by Nicolas Rosewick Nicolas Rosewick
    <blockquote> <p><strong>Possible duplicate</strong>: <a href="http://biostar.stackexchange.com/questions/822/how-do-you-manage-your-files-directories-for-your-projects">http://biostar.stackexchange.com/questions/822/how-do-you-manage-your-files-directories-for-your-projects</a></p> </blockquote> <p>Hi,</p> <p>My lab recently received a new server. We're now thinking on how organize the data and results on …
  • 'What Scholarships Are Available In The Uk'.
    written by Ammu • Ammu
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/11734/please-help-me">Please help me…</a> </p> </blockquote> <p>Please inform, if there are any scholarships for Msc(bioinformatics) in Uk.</p>
  • Analysing Multiple Exome Datasets
    written by User 9126 • User 9126
    <p>Dear All, We have whole exome sequencing data of ten samples from illumina. While I was looking for a pipeline to analyse this data i …
  • Can Bam File Be Converted To Fasta Format?
    written by Hmm • Hmm
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/6993/convert-bam-file-to-fasta-file">Convert bam file to fasta file</a> </p> </blockquote> <p>Can we convert a whole human genome bam file into fasta format. …
  • Can The Coding Region Of One Gene Be The Non-Coding Region Of Another Gene?
    written by Saher Faiza • Saher Faiza
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/8771/gene-coding-and-non-coding-regions">Gene coding and non-coding regions</a> </p> </blockquote> <p>can a coding region of one gene be the non-coding region in another …
  • Using .Bed-Files To Improve Ngs Pipeline?
    written by Oliver Oliver
    <p>Hello folks,</p> <p>I followed this pipeline to process some single read NGS data:</p> <p><a href="http://biostar.stackexchange.com/questions/1269/what-is-the-best-pipeline-for-human-whole-exome-sequencing">http://biostar.stackexchange.com/questions/1269/what-is-the-best-pipeline-for-human-whole-exome-sequencing</a></p> <p>Since we used the Agilent SureSelect Kit we have a …
  • How Can I Retrieve All Of Human Promoter Sequences?
    written by Mohammad Reza Bakhtiarizadeh Mohammad Reza Bakhtiarizadeh
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/888/how-to-get-promoter-sequences-for-human-genes">How to get promoter sequences for human genes?</a> </p> </blockquote> <p>Hi all, I need all of human promoter sequences and …
  • Difference Between Coverage And Read Depth ?
    written by Monzoor • Monzoor
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/638/what-is-the-sequencing-depth">What is the sequencing ‘depth’ ?</a> </p> </blockquote> <p>What is the difference between coverage and read depth ?</p>
  • System Commands For Alignment Viewer In Php
    written by Aparna • Aparna
    <blockquote> <p><strong>Possible Duplicate:</strong> <br/> <a href="http://biostar.stackexchange.com/questions/1936/clustalw-in-php">clustalW in php</a> </p> </blockquote> <p>Thanks in advance</p> <p>Is there any alignment viewer available to use in the php program …