Best software to identify differentially methylated regions in Chipseq data?
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You can't identify differentially methylated regions from ChIPseq data. You can from MeDIPseq, though.
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Devon Ryan
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@madkitty...not sure what you mean for "chip seq methylation data"...chip seq or methylation? are you trying to integrate them? what have you tried so far? which kind of methylation data do you have? also, writing in bold doesn't give you a faster answer..
I meant CHIPSeq data .. oops :)