segmentation fault (core dumped) in IGBlast

I'm analyzing antibodies and I'm using IGBlastn standalone for it. I have created my own database using makeblastdb. When running it gives the error Segmentation fault (core dumped). Does anyone know how to fix this?

thanks

segmentationfault igblast antibody

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updated 5.4 years ago by Ram

• written 11.8 years ago by jellevandewege

1 answer

According to Blastn Segmentation Fault it appears that the query is too long/the number of queries is too large. A good idea would be to split data in several chunks. Please also check out this IgBlastWrapper, specially designed to handle antibody libraries

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written 11.8 years ago by mikhail.shugay

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