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Installation of SubcloneSeeker

I would like to try SubcloneSeeker, but have run into problems at the installation step. This document https://github.com/yiq/SubcloneSeeker/blob/master/INSTALL states that I should run the file "configure" from the downloaded directory. However the directory looks like this:

doc
examples.tar.gz
INSTALL
LICENSE
Makefile
README
README.md
test
utils
vendor
src
examples

There is no "configure" file. Sorry if I am missing something obvious.

genome
• 2,636 views • link
written by genomicist • genomicist

Just type `make` in the command line

• 0 views • link
written by Ying W Ying W

Did you get SubcloneSeeker to run?

I looked at the examples, but I can't figure out how to use my own mutation/CNV data

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written by Pascal Pascal

No I haven't run it. I realized that SubcloneSeeker needs CP (cellular prevalences) as input, and you need to get these using other software, so that's where I am now.

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written by genomicist • genomicist

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