pdb id converter to gene id of EBI
Hello
I have many (1000000 pdbid) pdbid, could you please tell me how convert pdb id to gene accession number.
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Ram
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gbahramali •
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gbahramali •
1 answer
Conceptualy http://www.ebi.ac.uk/pdbe/ has done the mappings for you via UniProt. Quite what the most technically efficient way to mine out what you need I'll leave others to suggest. But note this lands you in the classic protein-to-gene issue that gets difficult for deep phylogeny
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OHH EXCUSE ME
YOU ARE RIGHT, I have 10000 dssp id with chain and I think that I have 5000 pdb id
Does all the PDB IDs belong to human/mouse proteins? or other molecules?
I think that all ,