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java script multiple sequence alignment viewer

Does anyone know about any free javascript sequence alignment viewers other than JSAV?

sequence javascript alignment
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updated by sina.majidian • sina.majidian • written by lait lait

3 answers

There's a GSOC student, Sebastian Wilzbach, working on a JS MSA viewer, mentored by Tatyana Goldberg. This is his blog, which has some links to demos and this is the code.

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updated by Ram Ram • written by Mitch Skinner Mitch Skinner

Hi, that would be myself :)

The component is still in an alpha stage (we are currently working on a way to display >15k sequences). Nevertheless I am happy to help you if you want to experiment with a nightly version.

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updated by Ram Ram • written by wilzbach • wilzbach
ShareMSA let's you view (not edit) multiple sequence alignments online. It uses javascript and websockets so that multiple people can view and annotate the same alignment simultaneously.
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written by jeff • jeff

It's an old post .. but just want to mention that the website seems not working anymore in 2025.

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written by sina.majidian • sina.majidian

Have you tried javascript API for JalviewLite (http://www.jalview.org/examples/jalviewLiteJs.html)?

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written by mikhail.shugay mikhail.shugay

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