miRNA isomiR analysis using Biostrings
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9.9 years ago
Palgrave ▴ 110

I am using the consensusMatrix function from the Biostrings package to analyse nucleotide distribution in my FASTA sequence. Has anyone done this for isomiRs where nucleotide position 1 is not defined as it is for the mature sequence? How would you interpret a plot based in isomir input?

sequence R • 1.7k views
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