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what are the best resource to learn Linux bash scripting for Bioinformatics
9
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19 months ago
jack • 760
Germany

Hi all,

I'm starting to learn bash scripting from begining to advanced level. I'm looking for good resources or tutorial for it.

Where should I start ? what are the best resources to learn it ?

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0
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First of all build strong foundation for your Linux administration skills. Once you get sound knowledge on that, refer different online and offline text books on Linux. If you want to build skills in Linux administration skills refer this link - http://www.kerneltraining.com/linux-admin-training/

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6
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19 months ago
1234Jc4321 • 410
Quebec City

Maybe you could start by looking at those links.

http://tldp.org/LDP/abs/html/

http://wiki.bash-hackers.org/scripting/tutoriallist

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2.3 years ago
Jason • 890
United States

I like this really short tutorial on how to do some simple bash scripting. This may help getting you started or explaining a few simple concepts differently than the other post.

http://www.bashguru.com/2009/11/how-to-pass-arguments-to-shell-script.html

Here's another more extensive tutorial for beginners:

http://linuxconfig.org/bash-scripting-tutorial

A quick guide:

http://www.panix.com/~elflord/unix/bash-tute.html

Slightly more extensive beginners handbook on shell/bash:

http://www.freeos.com/guides/lsst/

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17 months ago
Prakki Rama ♦ 2.3k
Singapore

Another one, I look frequently in unix school for my needs.

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6.3 years ago
Australia

If you're not familiar with the command line then a good place to start is:

http://ryanstutorials.net/linuxtutorial/

Then head on over to:

http://ryanstutorials.net/bash-scripting-tutorial/

for a more thorough look at scripting.

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This is a great resource for the beginners.

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2.4 years ago
Ann ♦ 2.2k
Concord NC USA

I like Learning the bash shell from O'Reilly Press and use it whenever I teach Unix.

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