Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : all
1
vote
2
replies
1.3k
views
Answer: Answer: Bedfile format deeptools
2.7 years ago by Devon Ryan 104k
0
votes
1
reply
900
views
Comment: Comment: Methylome Data or DE Analysis
2.8 years ago by Devon Ryan 104k
1
vote
0
replies
1.8k
views
Comment: Comment: Inserting Gaps into FASTA files for Alignment to Reference
2.8 years ago by Devon Ryan 104k
1
vote
0
replies
4.2k
views
Comment: Comment: GC content in bilsulfite converted library
2.8 years ago by Devon Ryan 104k
0
votes
1
reply
12k
views
Comment: Comment: ViennaRNA error: ImportError: No module named _RNA
2.8 years ago by Devon Ryan 104k
3
votes
0
replies
1.3k
views
Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
2.9 years ago by Devon Ryan 104k
4
votes
1
reply
1.1k
views
Comment: Comment: Bioinformatics Definitions
2.9 years ago by Devon Ryan 104k
0
votes
0
replies
4.5k
views
Comment: Comment: Installing samtools version 1.12
2.9 years ago by Devon Ryan 104k
1
vote
1
reply
856
views
Answer: Answer: Look at Different Locus in the Bam File
2.9 years ago by Devon Ryan 104k
1
vote
1
reply
2.3k
views
Answer: Answer: Remove prefix chrom:position before rsIDs
2.9 years ago by Devon Ryan 104k
4
votes
1
reply
4.5k
views
Answer: Answer: Installing samtools version 1.12
2.9 years ago by Devon Ryan 104k
2
votes
1
reply
1.7k
views
Comment: Comment: How much weights a million reads
3.0 years ago by Devon Ryan 104k
0
votes
0
replies
3.7k
views
Comment: Comment: When is recommended to remove or keep Unpaired "Orphan" reads in downstream anal
3.0 years ago by Devon Ryan 104k
0
votes
1
reply
1.3k
views
Comment: Comment: Multi-factor Analysis in DeSEQ2
3.0 years ago by Devon Ryan 104k
0
votes
0
replies
615
views
Answer: Answer: Are [*.removed.sorted.bai] and [*.metrix.txt] needed for the next step?
3.0 years ago by Devon Ryan 104k
0
votes
0
replies
2.7k
views
Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
4
votes
1
reply
2.7k
views
Answer: Answer: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
0
votes
1
reply
2.7k
views
Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
0
votes
1
reply
2.7k
views
Comment: Comment: deeptools 3.5 Segmentation fault:11
3.0 years ago by Devon Ryan 104k
0
votes
0
replies
729
views
Comment: Comment: Performance metrics of aligners and variant callers
3.1 years ago by Devon Ryan 104k
0
votes
1
reply
4.2k
views
Comment: Comment: Multiqc
3.1 years ago by Devon Ryan 104k
1
vote
0
replies
2.9k
views
Comment: Comment: Deeptools, ComputeMatrix and plotProfile
3.1 years ago by Devon Ryan 104k
0
votes
2
replies
2.9k
views
Answer: Answer: Deeptools, ComputeMatrix and plotProfile
3.1 years ago by Devon Ryan 104k
1
vote
0
replies
918
views
Answer: Answer: calculate area under curve for profile plot (deepTools)
3.1 years ago by Devon Ryan 104k
0
votes
0
replies
811
views
Comment: Comment: Does GISAID fasta files contain spike protein or whole genome sequence?
3.1 years ago by Devon Ryan 104k
0
votes
1
reply
3.8k
views
Comment: Comment: DESeq2 multi-factor design
3.1 years ago by Devon Ryan 104k
1
vote
1
reply
2.3k
views
Comment: Comment: ATAC-Seq: Filter bams for differential analysis or not
3.1 years ago by Devon Ryan 104k
0
votes
1
reply
865
views
Comment: Comment: Suggestion for modelling transcriptomics analysis
3.1 years ago by Devon Ryan 104k
0
votes
0
replies
4.1k
views
Comment: Comment: Converting beta value to M value (when beta=1)
3.1 years ago by Devon Ryan 104k
45
votes
23
replies
6.3k
views
6 follow
Forum: biostar.slack.com: Chat for the biostars community -- [ feel free to join ]
chat slack
updated 15 months ago by 43k • written 6.2 years ago by 104k
1
vote
0
replies
1.0k
views
Answer: Answer: Can I control the exposure time as a batch effect?
3.2 years ago by Devon Ryan 104k
1
vote
0
replies
1.4k
views
Answer: A: If I want to learn bioinformatics as a computer scientist, would it help to lear
3.2 years ago by Devon Ryan 104k
0
votes
1
reply
965
views
Comment: C: Lmfit function, to analyse differential expressions, not coming from arrays
3.2 years ago by Devon Ryan 104k
0
votes
1
reply
1.2k
views
Comment: C: A layman trying to understand what a FASTA file is
3.2 years ago by Devon Ryan 104k
0
votes
0
replies
7.3k
views
Comment: C: Remove supplementary alignments from a bam file
3.2 years ago by Devon Ryan 104k
6
votes
0
replies
7.9k
views
Answer: A: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
3.2 years ago by Devon Ryan 104k
0
votes
0
replies
7.9k
views
Comment: C: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
3.2 years ago by Devon Ryan 104k
0
votes
1
reply
7.9k
views
Comment: C: Update to tbb (2021.1.1, conda-forge) breaks bowtie2 (bioconda)
3.2 years ago by Devon Ryan 104k
3
votes
0
replies
4.4k
views
Comment: C: bamCoverage bin size for narrow and broad histone marks
3.2 years ago by Devon Ryan 104k
1
vote
0
replies
7.5k
views
Comment: C: The meaning of differentially expressed (DE) gene level
3.2 years ago by Devon Ryan 104k
0
votes
0
replies
880
views
Comment: C: Calculating fold change...CONFUSION
3.2 years ago by Devon Ryan 104k
1
vote
1
reply
880
views
Answer: A: Calculating fold change...CONFUSION
3.3 years ago by Devon Ryan 104k
2
votes
0
replies
56k
views
Comment: C: How To Write Data In A Granges Object To A Bed File.
updated 3.3 years ago by 43k • written 10.4 years ago by 104k
34
votes
5
replies
56k
views
Answer: A: How To Write Data In A Granges Object To A Bed File.
updated 3.3 years ago by 43k • written 10.4 years ago by 104k
1
vote
0
replies
3.0k
views
Comment: C: What are those black lines in my heatmap?
3.3 years ago by Devon Ryan 104k
2
votes
1
reply
3.0k
views
Answer: A: What are those black lines in my heatmap?
3.3 years ago by Devon Ryan 104k
0
votes
0
replies
3.8k
views
Comment: C: BigWig from ensembl assembly to UCSC session
3.3 years ago by Devon Ryan 104k
0
votes
1
reply
3.8k
views
Comment: C: BigWig from ensembl assembly to UCSC session
3.3 years ago by Devon Ryan 104k
0
votes
0
replies
9.8k
views
Comment: C: how is obtained the BED score values (the 5th column of the bed files) in BED fi
3.3 years ago by Devon Ryan 104k
1
vote
0
replies
5.7k
views
Answer: A: error with vcfutils when building consensus sequence with samtools and bcftools
updated 3.3 years ago by 43k • written 9.3 years ago by 104k
10,041 results • Page 2 of 201
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6