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Failed to download data from EBI with ascp
EBI aspera
updated 21 days ago by 142k • written 21 days ago by ▴ 60
5
votes
2
replies
831
views
Why an extremely large number of reads are mapped to several chromosomes in RNA-seq data?
ENCODE RNA-seq
updated 18 months ago by 3.9k • written 18 months ago by ▴ 60
0
votes
1
reply
466
views
Different reads number in the ENCODE paired-end RNA-seq data
ENCODE RNA-seq
updated 18 months ago by 11k • written 18 months ago by ▴ 60
0
votes
0
replies
457
views
How does the ENCODE project define "default data"?
database ENCODE
2.4 years ago by biock ▴ 60
4
votes
7
replies
4.3k
views
Why Salmon produces different quantification results compared with featureCounts for lncRNA genes?
RNA-Seq next-gen
3.8 years ago by biock ▴ 60
0
votes
1
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4.7k
views
Should I use gene_id or gene_name in featureCounts for differential expression gene analysis?
RNA-seq gtf ensembl
updated 5.0 years ago by ★ 16k • written 5.0 years ago by ▴ 60
3
votes
1
reply
2.5k
views
Why many ENSEMBL gene ID cannot be converted to Entrez ID using org.Hs.eg.db in R?
R Ensembl Entrez gene
5.1 years ago by biock ▴ 60
4
votes
3
replies
1.4k
views
How to deal with AB SOLiD paired end reads?
RNA-Seq fastq AB SOLiD alignment
updated 5.1 years ago by 35k • written 5.1 years ago by ▴ 60
3
votes
2
replies
1.2k
views
How to get SNV abundance in NGS analysis
NGS SNP GATK
5.8 years ago by biock ▴ 60
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