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840
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Comment: C: Get sequencing informations from NCBI with acc number
4.1 years ago by Chvatil ▴ 130
1
vote
4
replies
840
views
Get sequencing informations from NCBI with acc number
ncbi Assembly efetch
4.1 years ago by Chvatil ▴ 130
0
votes
1
reply
2.5k
views
Comment: C: Get distance matrix based on node tree
4.2 years ago by Chvatil ▴ 130
1
vote
3
replies
2.5k
views
Get distance matrix based on node tree
tree distance matrix phylogeny
updated 4.2 years ago by 21k • written 4.2 years ago by ▴ 130
0
votes
0
replies
697
views
Codon substitution model (codeml)
dnds codeml paml
updated 4.2 years ago by 20 • written 4.4 years ago by ▴ 130
0
votes
0
replies
1.3k
views
Comment: C: Remove sequence by coordinates with Biopython
4.3 years ago by Chvatil ▴ 130
1
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4
replies
1.3k
views
Remove sequence by coordinates with Biopython
biopython fasta
4.3 years ago by Chvatil ▴ 130
0
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1
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1.3k
views
Comment: C: Remove sequence by coordinates with Biopython
4.3 years ago by Chvatil ▴ 130
0
votes
1
reply
996
views
Hisat2 --sra-acc option (redirect sra file to a desired directory)
hisat2 sra ncbi
4.4 years ago by Chvatil ▴ 130
1
vote
0
replies
46k
views
Comment: C: Fast download of FASTQ files from the European Nucleotide Archive (ENA)
4.4 years ago by Chvatil ▴ 130
0
votes
0
replies
1.7k
views
Comment: C: Access to SRA read from a specific genome assembly on NCBI
4.4 years ago by Chvatil ▴ 130
0
votes
0
replies
1.3k
views
Comment: C: Set the max coverage wanted with Hisat2 ?
4.4 years ago by Chvatil ▴ 130
3
votes
5
replies
1.3k
views
Set the max coverage wanted with Hisat2 ?
Hisat2 mapping
4.4 years ago by Chvatil ▴ 130
0
votes
1
reply
1.3k
views
Comment: C: Set the max coverage wanted with Hisat2 ?
4.4 years ago by Chvatil ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: Access to SRA read from a specific genome assembly on NCBI
4.4 years ago by Chvatil ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: Access to SRA read from a specific genome assembly on NCBI
4.4 years ago by Chvatil ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: Access to SRA read from a specific genome assembly on NCBI
4.4 years ago by Chvatil ▴ 130
0
votes
1
reply
1.7k
views
Comment: C: Access to SRA read from a specific genome assembly on NCBI
4.4 years ago by Chvatil ▴ 130
3
votes
10
replies
1.7k
views
Access to SRA read from a specific genome assembly on NCBI
ncbi Assembly reads
4.4 years ago by Chvatil ▴ 130
0
votes
0
replies
1.2k
views
Comment: C: Use esearch on python to get nucleotide sequence from the protein ses id
4.5 years ago by Chvatil ▴ 130
0
votes
1
reply
1.2k
views
Comment: C: Use esearch on python to get nucleotide sequence from the protein ses id
4.5 years ago by Chvatil ▴ 130
1
vote
4
replies
1.2k
views
Use esearch on python to get nucleotide sequence from the protein ses id
esearch python entrez
4.5 years ago by Chvatil ▴ 130
0
votes
0
replies
944
views
Get pvalue and/or confidence interval of dN/dS from the codeml output
python dNdS
4.5 years ago by Chvatil ▴ 130
0
votes
2
replies
702
views
Recover from protein ID the corresponding nucleotide ID .
fasta python ncbi
updated 4.5 years ago by ▴ 600 • written 4.5 years ago by ▴ 130
1
vote
0
replies
1.5k
views
Comment: C: Count number of monophyletic groups within pylogeny
5.0 years ago by Chvatil ▴ 130
4
votes
2
replies
1.5k
views
Count number of monophyletic groups within pylogeny
phylogeny monophyletic
updated 5.0 years ago by 21k • written 5.0 years ago by ▴ 130
0
votes
0
replies
901
views
What kind of protein matrix substitution use for blastX divergent sequences
blast diamond homology matrix
5.2 years ago by Chvatil ▴ 130
0
votes
1
reply
3.7k
views
Comment: C: output path issue on Busco (python)
5.3 years ago by Chvatil ▴ 130
0
votes
1
reply
3.7k
views
Comment: C: output path issue on Busco (python)
5.3 years ago by Chvatil ▴ 130
0
votes
2
replies
6.8k
views
Comment: A: Recover fasta sequences in database from the blast output 6
5.3 years ago by Chvatil ▴ 130
6
votes
23
replies
6.8k
views
Recover fasta sequences in database from the blast output 6
blast output fasta
5.3 years ago by Chvatil ▴ 130
0
votes
0
replies
6.8k
views
Comment: C: Recover fasta sequences in database from the blast output 6
5.3 years ago by Chvatil ▴ 130
0
votes
1
reply
6.8k
views
Comment: C: Recover fasta sequences in database from the blast output 6
5.3 years ago by Chvatil ▴ 130
0
votes
2
replies
6.8k
views
Comment: C: Recover fasta sequences in database from the blast output 6
5.3 years ago by Chvatil ▴ 130
0
votes
1
reply
6.8k
views
Comment: C: Recover fasta sequences in database from the blast output 6
5.3 years ago by Chvatil ▴ 130
0
votes
16
replies
4.6k
views
Issue using MaSuRCA-3.2.6
Assembly assembler
updated 5.7 years ago by 20 • written 5.9 years ago by ▴ 130
0
votes
10
replies
2.9k
views
No output nr file after running makedb
blast diamond makedb
updated 5.8 years ago by 20 • written 6.0 years ago by ▴ 130
0
votes
0
replies
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
8
votes
22
replies
2.8k
views
6 follow
De novo assembly programm
assembly
5.8 years ago by Chvatil ▴ 130
0
votes
0
replies
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
1
reply
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
1
reply
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
2
replies
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
0
replies
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
2
replies
2.8k
views
Comment: C: De novo assembly programm
5.8 years ago by Chvatil ▴ 130
0
votes
1
reply
2.8k
views
Comment: C: De novo assembly programm
5.9 years ago by Chvatil ▴ 130
0
votes
1
reply
4.6k
views
Comment: C: Issue using MaSuRCA-3.2.6
5.9 years ago by Chvatil ▴ 130
0
votes
1
reply
4.6k
views
Comment: C: Issue using MaSuRCA-3.2.6
5.9 years ago by Chvatil ▴ 130
0
votes
1
reply
4.6k
views
Comment: C: Issue using MaSuRCA-3.2.6
5.9 years ago by Chvatil ▴ 130
0
votes
1
reply
4.6k
views
Comment: C: Issue using MaSuRCA-3.2.6
5.9 years ago by Chvatil ▴ 130
157 results • Page 2 of 4
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