Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
0
votes
0
replies
410
views
Comment: Comment: PCA plot
12 days ago by jkim ▴ 170
0
votes
0
replies
711
views
Comment: Comment: PCA plot (Suggestions Needed)
14 days ago by jkim ▴ 170
1
vote
0
replies
257
views
Comment: Comment: Error during demultiplexing by bcl2fastq
27 days ago by jkim ▴ 170
0
votes
1
reply
639
views
Comment: Comment: 99.9999% of Q30 bases is normal?
27 days ago by jkim ▴ 170
0
votes
1
reply
639
views
Comment: Comment: 99.9999% of Q30 bases is normal?
27 days ago by jkim ▴ 170
0
votes
0
replies
449
views
Comment: Comment: create a gene count matrix csv file from seurat object
29 days ago by jkim ▴ 170
0
votes
1
reply
449
views
Comment: Comment: create a gene count matrix csv file from seurat object
29 days ago by jkim ▴ 170
0
votes
1
reply
449
views
Comment: Comment: create a gene count matrix csv file from seurat object
29 days ago by jkim ▴ 170
2
votes
6
replies
449
views
create a gene count matrix csv file from seurat object
Seurat sparseMatrix
29 days ago by jkim ▴ 170
1
vote
1
reply
622
views
Answer: Answer: RNAseq analysis: how to add new gene into an existing worm based reference
3 months ago by jkim ▴ 170
1
vote
1
reply
1.1k
views
Comment: Comment: bcl2fastq troubleshooting all reads dumped to "Undetermined"
4 months ago by jkim ▴ 170
0
votes
0
replies
234
views
% rRNAs discrepancy between sortMeRNA and read count matrices
rRNA
4 months ago by jkim ▴ 170
0
votes
0
replies
1.3k
views
Comment: Comment: Nextflow bwa-mem2 pipeline/channel question
6 months ago by jkim ▴ 170
0
votes
2
replies
1.4k
views
Comment: Comment: Mentor for a beginner bioinformatics student
6 months ago by jkim ▴ 170
0
votes
0
replies
739
views
Comment: Comment: Merge fastq files across different lanes in Nextflow
6 months ago by jkim ▴ 170
3
votes
3
replies
739
views
Merge fastq files across different lanes in Nextflow
Nextflow Fastq
6 months ago by jkim ▴ 170
1
vote
0
replies
739
views
Answer: Answer: Merge fastq files across different lanes in Nextflow
6 months ago by jkim ▴ 170
0
votes
0
replies
1.2k
views
Comment: Comment: STAR index not working
7 months ago by jkim ▴ 170
0
votes
1
reply
581
views
Comment: Comment: Batch effect consideration (re-seq the same sample twice)
7 months ago by jkim ▴ 170
4
votes
3
replies
581
views
Batch effect consideration (re-seq the same sample twice)
RNA-seq batch-effect
updated 7 months ago by 43k • written 7 months ago by ▴ 170
0
votes
0
replies
826
views
Comment: Comment: One sample has quite different # of reads from different lanes.
8 months ago by jkim ▴ 170
0
votes
1
reply
826
views
Comment: Comment: One sample has quite different # of reads from different lanes.
8 months ago by jkim ▴ 170
4
votes
4
replies
826
views
One sample has quite different # of reads from different lanes.
demultiplexing illumina fastq
8 months ago by jkim ▴ 170
0
votes
0
replies
1.1k
views
Comment: Comment: Double biological replication when using DESeq2
10 months ago by jkim ▴ 170
0
votes
0
replies
755
views
Comment: Comment: How to interpret RNAseq output?
10 months ago by jkim ▴ 170
1
vote
0
replies
597
views
Comment: Comment: mRNA library preparation Adapter ligation
12 months ago by jkim ▴ 170
0
votes
0
replies
1.1k
views
Comment: Comment: How to trim reads for Chip Seq analysis
12 months ago by jkim ▴ 170
0
votes
0
replies
569
views
Answer: Answer: What is the best aligner for stranded RNASeq
12 months ago by jkim ▴ 170
0
votes
1
reply
1.7k
views
Comment: Comment: trimmomatic on scRNA seq data
12 months ago by jkim ▴ 170
0
votes
0
replies
1.7k
views
Comment: Comment: Comparing two RNA-Seq datasets
19 months ago by jkim ▴ 170
0
votes
1
reply
1.7k
views
Answer: Answer: Comparing two RNA-Seq datasets
19 months ago by jkim ▴ 170
1
vote
1
reply
823
views
Comment: Comment: DE analysis with multiple factors
19 months ago by jkim ▴ 170
0
votes
1
reply
1.3k
views
Comment: Comment: Snakemake + singularity fails to locate bwa index files.
20 months ago by jkim ▴ 170
0
votes
1
reply
1.3k
views
Comment: Comment: Snakemake + singularity fails to locate bwa index files.
20 months ago by jkim ▴ 170
3
votes
5
replies
1.3k
views
Snakemake + singularity fails to locate bwa index files.
singularity snakemake bwa
updated 20 months ago by 22k • written 20 months ago by ▴ 170
0
votes
0
replies
1.5k
views
Comment: Comment: Read coverage shows a difference in IGV
20 months ago by jkim ▴ 170
0
votes
0
replies
1.5k
views
Comment: Comment: Read coverage shows a difference in IGV
20 months ago by jkim ▴ 170
0
votes
0
replies
1.5k
views
Comment: Comment: Read coverage shows a difference in IGV
20 months ago by jkim ▴ 170
0
votes
0
replies
1.5k
views
Comment: Comment: Read coverage shows a difference in IGV
20 months ago by jkim ▴ 170
3
votes
7
replies
1.5k
views
Read coverage shows a difference in IGV
coverage BAM
20 months ago by jkim ▴ 170
0
votes
0
replies
5.5k
views
Comment: Comment: Is there a limit for SAMTOOLS tview option?
20 months ago by jkim ▴ 170
0
votes
0
replies
1.4k
views
Comment: Comment: Filter out reads with hidden tags in bam files
20 months ago by jkim ▴ 170
0
votes
0
replies
1.4k
views
Comment: Comment: Filter out reads with hidden tags in bam files
21 months ago by jkim ▴ 170
0
votes
0
replies
1.4k
views
Comment: Comment: Filter out reads with hidden tags in bam files
21 months ago by jkim ▴ 170
4
votes
7
replies
1.4k
views
Filter out reads with hidden tags in bam files
BAM samtools
20 months ago by jkim ▴ 170
0
votes
1
reply
1.4k
views
Answer: Answer: Filter out reads with hidden tags in bam files
21 months ago by jkim ▴ 170
0
votes
0
replies
952
views
Answer: Answer: Counts from STAR with stranded protocol
23 months ago by jkim ▴ 170
0
votes
1
reply
1.6k
views
Comment: Comment: snakemake workflow
24 months ago by jkim ▴ 170
0
votes
0
replies
1.6k
views
Comment: Comment: Biopython first project help
2.1 years ago by jkim ▴ 170
0
votes
1
reply
1.6k
views
Comment: Comment: Biopython first project help
2.1 years ago by jkim ▴ 170
70 results • Page 1 of 2
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6