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jkim
jkim
Reputation:
250
Joined:
9.5 years ago
Last seen:
3 days ago
Location:
United States
Latest posts by user
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2 replies
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Comment: Comment: Correction & Advice Input for a design of a CUT&RUN pipeline
written by jkim • jkim
1 vote
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Comment: Comment: Large FASTQ file processing failure: MetaPhlAn 3.0.7 + HUMAnN on 16-core 64GB sy
written by jkim • jkim
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Answer: Answer: LM in R: One way anova, Linear regression and T-test
written by jkim • jkim
1 vote
1 reply
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Answer: Answer: Sequencing run and batch variation
written by jkim • jkim
1 vote
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Comment: Comment: RNASeq QC and STAR results confused
written by jkim • jkim
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Comment: Comment: RNAseq requirements: Biological and Technical replicates
written by jkim • jkim
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1 reply
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Comment: Comment: RNAseq requirements: Biological and Technical replicates
written by jkim • jkim
1 vote
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Comment: Comment: How do I interpert PCA before differential expression analysis
written by jkim • jkim
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Comment: Comment: A question about model matrix and contrast
written by jkim • jkim
1 vote
2 replies
865 views
A question about model matrix and contrast
makecontrasts limma
written by jkim • jkim
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Comment: Comment: comparison interpretation
written by jkim • jkim
1 vote
1 reply
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Comment: Comment: DESeq2 design for differential expression with 2 timepoints and 2 controls
written by jkim • jkim
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3 replies
914 views
Construct correct contrast
contrast model-matrix design-matrix
written by jkim • jkim
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Comment: Comment: Different comparisons in RNASeq Analysis
written by jkim • jkim
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1 reply
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Comment: Comment: Different comparisons in RNASeq Analysis
written by jkim • jkim
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2 replies
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Comment: Comment: Addressing two nuisance factors in RNAseq
written by jkim • jkim
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4 replies
1.2K views
Addressing two nuisance factors in RNAseq
bulkrnaseq
updated by ATpoint ATpoint • written by jkim • jkim
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Comment: Comment: DESEQ with time series data on mutant vs. wild-type?
written by jkim • jkim
1 vote
1 reply
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Comment: Comment: DESEQ with time series data on mutant vs. wild-type?
written by jkim • jkim
0 votes
1 reply
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Comment: Comment: RNA seq data for normal samples
written by jkim • jkim
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