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Comment: Comment: WGCNA, correlation with trait data from different individuals
9 weeks ago by boczniak767 ▴ 850
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318
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WGCNA, correlation with trait data from different individuals
WGCNA
9 weeks ago by boczniak767 ▴ 850
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6
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6.3k
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Interpro Enrichment - Any Organism
enrichment function
updated 9 months ago by 43k • written 12.3 years ago by ▴ 850
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573
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Comment: Comment: snpEff custom database - high percentage of start/stop codon errors
10 months ago by boczniak767 ▴ 850
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2
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1.0k
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RSAT, meme to transfac conversion problem
meme transfac
updated 11 months ago by • 0 • written 2.7 years ago by ▴ 850
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505
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Two factors plus time, LRT with DEseq2
deseq2 time-course
13 months ago by boczniak767 ▴ 850
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0
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1.0k
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Answer: Answer: RSAT, meme to transfac conversion problem
2.7 years ago by boczniak767 ▴ 850
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1
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1.9k
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Comment: Comment: linux for genomics
2.7 years ago by boczniak767 ▴ 850
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0
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7.5k
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Comment: Comment: Understanding subsampling with Samtools
2.8 years ago by boczniak767 ▴ 850
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0
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9.7k
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Answer: Answer: How to get number of characters (nucleotides) in fasta file
2.9 years ago by boczniak767 ▴ 850
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0
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554
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retrieve all significant motifs from meme suite programs
meme
2.9 years ago by boczniak767 ▴ 850
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715
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Comment: Comment: RNA-Microarray-Data-Analysis
2.9 years ago by boczniak767 ▴ 850
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1.6k
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Comment: Comment: Extract transcript fasta using gff
2.9 years ago by boczniak767 ▴ 850
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2
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1.6k
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Extract transcript fasta using gff
fasta gff
2.9 years ago by boczniak767 ▴ 850
2
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1
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1.6k
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Answer: Answer: Genome annotation file GFF3 and GTF same? interchangeable?
2.9 years ago by boczniak767 ▴ 850
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1
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1.6k
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Comment: Comment: Is Ensemble VEP down right now?
2.9 years ago by boczniak767 ▴ 850
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1.2k
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Answer: Answer: quick way of contamination identification from fastq file
2.9 years ago by boczniak767 ▴ 850
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1
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2.8k
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Comment: Comment: How to perform GO enrichment using BiNGO at Cytoscape
2.9 years ago by boczniak767 ▴ 850
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1
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2.8k
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Comment: Comment: How to perform GO enrichment using BiNGO at Cytoscape
2.9 years ago by boczniak767 ▴ 850
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0
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1.4k
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Comment: Comment: cDNA database based on genome resequencing
2.9 years ago by boczniak767 ▴ 850
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1
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693
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Answer: Answer: Identical KEGG pathways enriched by up- and down-regulated genes
2.9 years ago by boczniak767 ▴ 850
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1
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2.8k
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Comment: Comment: How to perform GO enrichment using BiNGO at Cytoscape
2.9 years ago by boczniak767 ▴ 850
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1
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2.8k
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Answer: Answer: How to perform GO enrichment using BiNGO at Cytoscape
2.9 years ago by boczniak767 ▴ 850
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0
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1.4k
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Comment: Comment: cDNA database based on genome resequencing
2.9 years ago by boczniak767 ▴ 850
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1
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1.4k
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Comment: Comment: cDNA database based on genome resequencing
2.9 years ago by boczniak767 ▴ 850
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0
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1.4k
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Comment: Comment: cDNA database based on genome resequencing
2.9 years ago by boczniak767 ▴ 850
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0
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1.1k
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Answer: Answer: How can I retrieve genomic sequences from ENSEMBL in a window both up stream and
2.9 years ago by boczniak767 ▴ 850
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1
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1.5k
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Answer: Answer: Generating a background file to be used by Homer for motif identification
2.9 years ago by boczniak767 ▴ 850
0
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0
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992
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findMotifs vs findMotifsGenome, inequality of results
homer motifs
3.0 years ago by boczniak767 ▴ 850
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0
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1.9k
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Comment: Comment: Using R Studio on Cloud
3.0 years ago by boczniak767 ▴ 850
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0
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700
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TSS file format - loadPromoters.pl in Homer
TSS Homer
3.0 years ago by boczniak767 ▴ 850
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0
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997
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Comment: Comment: question about homer
3.0 years ago by boczniak767 ▴ 850
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0
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1.0k
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Comment: Comment: Overall mappability of genome
3.0 years ago by boczniak767 ▴ 850
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0
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1.4k
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Comment: Comment: cDNA database based on genome resequencing
3.0 years ago by boczniak767 ▴ 850
0
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0
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112k
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Comment: Comment: Convertion Of Gff3 To Gtf
3.0 years ago by boczniak767 ▴ 850
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7
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1.4k
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cDNA database based on genome resequencing
cDNA resequencing microarray
2.9 years ago by boczniak767 ▴ 850
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1
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2.0k
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Comment: Comment: bedGraphToBigWig
3.0 years ago by boczniak767 ▴ 850
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1
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1.0k
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Comment: Comment: Overall mappability of genome
3.0 years ago by boczniak767 ▴ 850
1
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3
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1.0k
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Overall mappability of genome
gem mappability ngs
3.0 years ago by boczniak767 ▴ 850
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0
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2.5k
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Comment: Comment: wig file from fasta
3.0 years ago by boczniak767 ▴ 850
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0
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3.7k
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Comment: Comment: BWA mem minimum read length
3.0 years ago by boczniak767 ▴ 850
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1
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1.5k
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Comment: Comment: How to verify putative miRNA
3.1 years ago by boczniak767 ▴ 850
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1
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1.1k
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bbmap, mapq and uniquelly mapped reads filtering
alignment mapq
updated 3.1 years ago by 142k • written 3.1 years ago by ▴ 850
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0
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611
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Comment: Comment: Raw read processing using trimmomatic
3.1 years ago by boczniak767 ▴ 850
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1
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3.0k
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Comment: Comment: How to merge and average BedGraph files
3.1 years ago by boczniak767 ▴ 850
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0
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1.3k
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Comment: Comment: Extension of reads
3.1 years ago by boczniak767 ▴ 850
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1
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3.0k
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Comment: Comment: How to merge and average BedGraph files
3.1 years ago by boczniak767 ▴ 850
1
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0
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1.0k
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Answer: Answer: Do FASTQ files from ArrayExpress already have adapter sequences trimmed?
3.1 years ago by boczniak767 ▴ 850
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0
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2.8k
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Comment: Comment: FAIRE for non-standard cultivar, mapping to reference, MAPQ
3.1 years ago by boczniak767 ▴ 850
0
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1
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2.8k
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Comment: Comment: FAIRE for non-standard cultivar, mapping to reference, MAPQ
3.1 years ago by boczniak767 ▴ 850
210 results • Page 1 of 5
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