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2
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376
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Comment: Comment: How I should set `STAR` parameters to keep all the intronic reads?
9 weeks ago by dsull ★ 6.0k
4
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1
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376
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Answer: Answer: How I should set `STAR` parameters to keep all the intronic reads?
9 weeks ago by dsull ★ 6.0k
1
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1
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638
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Comment: Comment: Huge decrease of BUS records using bustools
9 weeks ago by dsull ★ 6.0k
0
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1
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276
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Comment: Comment: Why does Phred+ encoding changes after trimming fastq files??
9 weeks ago by dsull ★ 6.0k
3
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0
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578
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Answer: Answer: Would reaching out to local labs and startups help with my career transition?
10 weeks ago by dsull ★ 6.0k
0
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0
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601
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Answer: Answer: Making PCA plot using variance instead of counts on Sleuth (plot_pca)
updated 10 weeks ago by 43k • written 10 weeks ago by ★ 6.0k
0
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0
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601
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Comment: Comment: Making PCA plot using variance instead of counts on Sleuth (plot_pca)
10 weeks ago by dsull ★ 6.0k
2
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0
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512
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Comment: Comment: How does kallisto handle multi mapped reads?
10 weeks ago by dsull ★ 6.0k
0
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0
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260
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Answer: Answer: Using tophat2 output for kallisto
10 weeks ago by dsull ★ 6.0k
0
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2
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512
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Comment: Comment: How does kallisto handle multi mapped reads?
10 weeks ago by dsull ★ 6.0k
2
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1
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389
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Answer: Answer: bulk seq vs. sc-seq
12 weeks ago by dsull ★ 6.0k
0
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1
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573
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Comment: Comment: Differential expression analysis with very high duplication rate
12 weeks ago by dsull ★ 6.0k
0
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1
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573
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Answer: Answer: Differential expression analysis with very high duplication rate
12 weeks ago by dsull ★ 6.0k
1
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0
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398
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Answer: Answer: How to do DESeq2 on Kallisto Data
12 weeks ago by dsull ★ 6.0k
0
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1
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465
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 6.0k
1
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0
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465
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 6.0k
1
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1
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638
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Comment: Comment: Why employ normalization methods, and how can they be utilized in DEG analysis?
3 months ago by dsull ★ 6.0k
2
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1
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633
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Comment: Comment: RNA seq, correlation, gene expression, STAR count
3 months ago by dsull ★ 6.0k
3
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1
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633
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Answer: Answer: RNA seq, correlation, gene expression, STAR count
3 months ago by dsull ★ 6.0k
0
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0
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
2
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1
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
0
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0
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142k
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Comment: Comment: The Biostar Handbook. A bioinformatics e-book for beginners.
3 months ago by dsull ★ 6.0k
1
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1
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1.1k
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Answer: Answer: I would like to exclude rRNA in RSEM and quantify it.
3 months ago by dsull ★ 6.0k
0
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0
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
1
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1
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
0
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1
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
0
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1
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
2
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2
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1.0k
views
Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 6.0k
1
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1
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1.0k
views
Comment: Comment: Can I estimate RNA velocity in Visium Spatial Gene Expression for FFPE
3 months ago by dsull ★ 6.0k
0
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 6.0k
0
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0
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612
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Comment: Comment: Problem in Salmon when indexing Rattus_norvegicus
3 months ago by dsull ★ 6.0k
1
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 6.0k
0
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2
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 6.0k
1
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2
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by dsull ★ 6.0k
3
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1
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327
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Answer: Answer: Using Expression of a Gene as a Linear Regression Variable
3 months ago by dsull ★ 6.0k
2
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1
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372
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Answer: Answer: STAR index generation killed after "inserting junctions into the genome indices"
updated 3 months ago by 82k • written 3 months ago by ★ 6.0k
0
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0
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881
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by dsull ★ 6.0k
0
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0
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881
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by dsull ★ 6.0k
4
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0
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2.1k
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Comment: Comment: First experiences matter
4 months ago by dsull ★ 6.0k
1
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1
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705
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
4 months ago by dsull ★ 6.0k
2
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1
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730
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Comment: Comment: Tests for the linear and non-linear relationship between two genes
4 months ago by dsull ★ 6.0k
0
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0
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865
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Comment: Comment: Inquiry Regarding Cutoff for Survival Analysis
4 months ago by dsull ★ 6.0k
0
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0
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568
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Comment: Comment: Kallisto-Bustools Output prpblems
4 months ago by dsull ★ 6.0k
1
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1
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568
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Answer: Answer: Kallisto-Bustools Output prpblems
4 months ago by dsull ★ 6.0k
0
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0
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579
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Comment: Comment: Kallisto-bustools output to Seurat Object
4 months ago by dsull ★ 6.0k
2
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1
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579
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Answer: Answer: Kallisto-bustools output to Seurat Object
4 months ago by dsull ★ 6.0k
0
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1
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782
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Comment: Comment: bwa-mem reproducibility
4 months ago by dsull ★ 6.0k
0
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1
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782
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Answer: Answer: bwa-mem reproducibility
4 months ago by dsull ★ 6.0k
3
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2
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1.8k
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Comment: Comment: What apps can read large FASTQ files on Windows?
4 months ago by dsull ★ 6.0k
3
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1
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1.1k
views
Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
4 months ago by dsull ★ 6.0k
619 results • Page 2 of 13
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