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Comment: Comment: High Malat-1 expression in single cell data
1 day ago by dsull ★ 6.0k
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279
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Comment: Comment: How does gene length effect the number of reads mapped
2 days ago by dsull ★ 6.0k
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522
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Comment: Comment: High Malat-1 expression in single cell data
2 days ago by dsull ★ 6.0k
0
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1
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279
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Comment: Comment: How does gene length effect the number of reads mapped
2 days ago by dsull ★ 6.0k
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306
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Comment: Comment: What purposes can TPM values be used for?
2 days ago by dsull ★ 6.0k
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422
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Comment: Comment: How should I make kallisto indexes?
5 days ago by dsull ★ 6.0k
0
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422
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Comment: Comment: How should I make kallisto indexes?
5 days ago by dsull ★ 6.0k
1
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522
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Comment: Comment: High Malat-1 expression in single cell data
6 days ago by dsull ★ 6.0k
0
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437
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Comment: Comment: What does it mean single base resolution in sequencing?
6 days ago by dsull ★ 6.0k
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1
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437
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Comment: Comment: What does it mean single base resolution in sequencing?
6 days ago by dsull ★ 6.0k
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1
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 days ago by dsull ★ 6.0k
2
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1
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
7 days ago by dsull ★ 6.0k
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713
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Comment: Comment: Heatmap and rna-seq
8 days ago by dsull ★ 6.0k
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518
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Comment: Comment: To get p-values for the TPM
10 days ago by dsull ★ 6.0k
1
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1
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518
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Comment: Comment: To get p-values for the TPM
11 days ago by dsull ★ 6.0k
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1
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521
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Comment: Comment: Is it Acceptable to Have Uniform Quality Scores in a FASTQ File?
11 days ago by dsull ★ 6.0k
1
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290
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Comment: Comment: from row count to tpm
12 days ago by dsull ★ 6.0k
1
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197
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Comment: Comment: Help/Direction Needed for Data Analysis of RNA
18 days ago by dsull ★ 6.0k
1
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1
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538
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Comment: Comment: STARsolo ; Reads are NOT mapped to transcriptome
25 days ago by dsull ★ 6.0k
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1
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359
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Comment: Comment: How to to establish haplotype-specific gene expression levels
25 days ago by dsull ★ 6.0k
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281
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Comment: Comment: rRNA depletion of RIP-seq samples
26 days ago by dsull ★ 6.0k
1
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1
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218
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Comment: Comment: In need of help with my RNA velocity trajectory inference pipeline!
27 days ago by dsull ★ 6.0k
1
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280
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Comment: Comment: Removing adapters in all the RNAseq samples regardless if they have or not, is i
4 weeks ago by dsull ★ 6.0k
0
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519
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Comment: Comment: Installing Cell Ranger
4 weeks ago by dsull ★ 6.0k
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405
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Comment: Comment: DESeq2 and normalization
5 weeks ago by dsull ★ 6.0k
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575
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Comment: Comment: STAR aligner options
5 weeks ago by dsull ★ 6.0k
1
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875
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Comment: Comment: Only one read per run - Trying to use CellRangerv7
5 weeks ago by dsull ★ 6.0k
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1
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575
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Comment: Comment: STAR aligner options
5 weeks ago by dsull ★ 6.0k
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0
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7.1k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
5 weeks ago by dsull ★ 6.0k
0
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1
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7.1k
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Comment: Comment: Differences between SMART-seq2, SMART-seq3, and 10x
5 weeks ago by dsull ★ 6.0k
1
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1
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741
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Comment: Comment: cutadapt not trimming all adapters in PE Illumina sequencing
6 weeks ago by dsull ★ 6.0k
0
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0
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244
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Comment: Comment: DEG (Differential expression gene) analysis
6 weeks ago by dsull ★ 6.0k
3
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1
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376
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Comment: Comment: Average expression of a sample in single-cell data
6 weeks ago by dsull ★ 6.0k
1
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324
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Comment: Comment: RNA-seq bam file normalization
8 weeks ago by dsull ★ 6.0k
2
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376
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Comment: Comment: How I should set `STAR` parameters to keep all the intronic reads?
9 weeks ago by dsull ★ 6.0k
1
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1
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638
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Comment: Comment: Huge decrease of BUS records using bustools
9 weeks ago by dsull ★ 6.0k
0
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1
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276
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Comment: Comment: Why does Phred+ encoding changes after trimming fastq files??
9 weeks ago by dsull ★ 6.0k
0
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0
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601
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Comment: Comment: Making PCA plot using variance instead of counts on Sleuth (plot_pca)
10 weeks ago by dsull ★ 6.0k
2
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512
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Comment: Comment: How does kallisto handle multi mapped reads?
10 weeks ago by dsull ★ 6.0k
0
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2
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512
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Comment: Comment: How does kallisto handle multi mapped reads?
10 weeks ago by dsull ★ 6.0k
0
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1
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574
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Comment: Comment: Differential expression analysis with very high duplication rate
12 weeks ago by dsull ★ 6.0k
0
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1
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467
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 6.0k
1
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0
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467
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Comment: Comment: How to exclude sex-dependent genes from RNASEQ?
12 weeks ago by dsull ★ 6.0k
1
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1
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638
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Comment: Comment: Why employ normalization methods, and how can they be utilized in DEG analysis?
3 months ago by dsull ★ 6.0k
2
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1
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633
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Comment: Comment: RNA seq, correlation, gene expression, STAR count
3 months ago by dsull ★ 6.0k
0
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0
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
2
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1
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1.1k
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Comment: Comment: I would like to exclude rRNA in RSEM and quantify other genes.
3 months ago by dsull ★ 6.0k
0
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0
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142k
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Comment: Comment: The Biostar Handbook. A bioinformatics e-book for beginners.
3 months ago by dsull ★ 6.0k
0
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0
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
1
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1
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992
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Comment: Comment: Troubleshooting RNA-seq data with DNA contamination
3 months ago by dsull ★ 6.0k
425 results • Page 1 of 9
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