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Comment:
Comment: Generating mpileup file using samtools
1 hour ago by
ATpoint
82k
1
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209
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Comment:
Comment: What analysis suitable to identify similarly expressed genes between two samples
2 hours ago by
ATpoint
82k
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153
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Comment:
Comment: Does comparing two different groups to a common third group introduce bias in th
4 hours ago by
ATpoint
82k
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212
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Comment:
Comment: Problem with data downloaded from Short Reads Archive (SRA)
23 hours ago by
ATpoint
82k
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212
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Comment:
Comment: Problem with data downloaded from Short Reads Archive (SRA)
1 day ago by
ATpoint
82k
1
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193
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Comment:
Comment: Odd alignment question/finding
1 day ago by
ATpoint
82k
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282
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Comment:
Comment: DESeq2 processing problems
1 day ago by
ATpoint
82k
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153
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Comment:
Comment: Longitudinal analysis of subpopulations: which approach is better?
4 days ago by
ATpoint
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298
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Comment:
Comment: How to assign cell types after integration in scRNA
4 days ago by
ATpoint
82k
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298
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Comment:
Comment: How to assign cell types after integration in scRNA
5 days ago by
ATpoint
82k
2
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1
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1.9k
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Comment:
Comment: NGS forensics: how to know if data is fabricated
5 days ago by
ATpoint
82k
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375
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Comment:
Comment: PCA plot
7 days ago by
ATpoint
82k
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3.7k
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Comment:
Comment: Treatment VS Control in Single Cell RNAseq analysis
7 days ago by
ATpoint
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228
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Comment:
Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
7 days ago by
ATpoint
82k
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301
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Comment:
Comment: Highest variable features in single cell data
8 days ago by
ATpoint
82k
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495
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Comment:
Comment: To get p-values for the TPM
9 days ago by
ATpoint
82k
1
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344
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Comment:
Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
9 days ago by
ATpoint
82k
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1
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348
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Comment:
Comment: Should I remove unlocalized scaffols in reference genome before alignment?
9 days ago by
ATpoint
82k
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137
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Comment:
Comment: Displaced fragment length distribution in ATAC-seq
10 days ago by
ATpoint
82k
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303
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Comment:
Comment: Per base sequence content error in RNAseq analysis
11 days ago by
ATpoint
82k
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1.4k
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Comment:
Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 days ago by
ATpoint
82k
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1.3k
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Comment:
Comment: Cellranger count error: Input FASTQ file ended prematurely
13 days ago by
ATpoint
82k
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302
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Comment:
Comment: Could you please assist in identifying this cluster?
13 days ago by
ATpoint
82k
0
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5.3k
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Comment:
Comment: Memory usage of picard Samsort
13 days ago by
ATpoint
82k
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505
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Comment:
Comment: Integration of transcriptomics and proteomics: difficult matching names
16 days ago by
ATpoint
82k
2
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317
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Comment:
Comment: Bwa sampe - BGI
16 days ago by
ATpoint
82k
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380
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Comment:
Comment: Ensembl gene id conversion
17 days ago by
ATpoint
82k
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1
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281
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Comment:
Comment: Statistical Advice Needed for RNAseq Data Analysis
17 days ago by
ATpoint
82k
1
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294
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Comment:
Comment: Can I compare kallisto counts from samples with different amount of reads?
17 days ago by
ATpoint
82k
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233
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Comment:
Comment: Error in edgeR/Deseq2 Analysis
17 days ago by
ATpoint
82k
1
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414
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Comment:
Comment: Deseq2 : Paired analysis or otherwise
17 days ago by
ATpoint
82k
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1
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23k
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Comment:
Comment: Gene Set Enrichment Analysis
19 days ago by
ATpoint
82k
0
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0
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343
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Comment:
Comment: 10x GEX and ADT data analysis in Seurat
20 days ago by
ATpoint
82k
1
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287
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Comment:
Comment: DepMap: siRNA and CRSIPR discrepancy
21 days ago by
ATpoint
82k
0
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1
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338
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Comment:
Comment: Questions about transfering wgs file to reference genome file
21 days ago by
ATpoint
82k
0
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1
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928
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Comment:
Comment: RNAseq of primary tumor and metastases in two different organ
21 days ago by
ATpoint
82k
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1
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338
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Comment:
Comment: Questions about transfering wgs file to reference genome file
21 days ago by
ATpoint
82k
0
votes
0
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2.4k
views
Comment:
Comment: Shannon vs Simpson for TCR diversity estimation
21 days ago by
ATpoint
82k
0
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1
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343
views
Comment:
Comment: 10x GEX and ADT data analysis in Seurat
21 days ago by
ATpoint
82k
0
votes
1
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1.2k
views
Comment:
Comment: ¿How I know if it is a batch effect or are real differences between my controls
26 days ago by
ATpoint
82k
0
votes
0
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391
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Comment:
Comment: lncRNA from TCGA
27 days ago by
ATpoint
82k
0
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1
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368
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Comment:
Comment: WGCNA website
27 days ago by
ATpoint
82k
1
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231
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Comment:
Comment: TMM normalization with DESeq2
4 weeks ago by
ATpoint
82k
1
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0
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185
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Comment:
Comment: Batch effect issue in RNA velocity analysis
4 weeks ago by
ATpoint
82k
1
vote
1
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382
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Comment:
Comment: Single cell analysis with "meta".tsv.gz file
4 weeks ago by
ATpoint
82k
1
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0
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388
views
Comment:
Comment: Homer giving troubles
4 weeks ago by
ATpoint
82k
1
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2
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268
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Comment:
Comment: P-value Threshold Consideration in Multi-Sample RNA-Seq Experiment
4 weeks ago by
ATpoint
82k
0
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0
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268
views
Comment:
Comment: can't download and use mageck-vispr for R?
4 weeks ago by
ATpoint
82k
0
votes
0
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509
views
Comment:
Comment: Installing Cell Ranger
4 weeks ago by
ATpoint
82k
1
vote
0
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258
views
Comment:
Comment: What are crucial apps/ scripts for cancer genome/data analysis that can be set
4 weeks ago by
ATpoint
82k
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