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Comment:
Comment: Gene reads all zero for each sample
1 day ago by
ATpoint
81k
1
vote
0
replies
138
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Comment:
Comment: Flow Cytometry Data Analysis by Seurat
1 day ago by
ATpoint
81k
2
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0
replies
138
views
Comment:
Comment: Volcano Plot Output Inquiry: Graphs Facing Down
1 day ago by
ATpoint
81k
0
votes
1
reply
11k
views
Comment:
Comment: How to Use Biostars, Part-I: Questions, Answers, Comments and Replies
1 day ago by
ATpoint
81k
0
votes
1
reply
267
views
Comment:
Comment: Piping samtools to R
1 day ago by
ATpoint
81k
0
votes
1
reply
267
views
Comment:
Comment: Piping samtools to R
1 day ago by
ATpoint
81k
0
votes
1
reply
156
views
Comment:
Comment: Error with goodSamplesGenes()
2 days ago by
ATpoint
81k
0
votes
1
reply
218
views
Answer:
Answer: Limma compare between 3 conditions vs 2 conditions
2 days ago by
ATpoint
81k
0
votes
1
reply
324
views
Comment:
Comment: Salmon Quantification in Alignment based-mode
2 days ago by
ATpoint
81k
0
votes
2
replies
219
views
Comment:
Comment: High number of detected genes per cell after doublet removal - scRNAseq data
2 days ago by
ATpoint
81k
0
votes
0
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145
views
Comment:
Comment: Cell communacations analysis. I only have the proteome of one type of cell
2 days ago by
ATpoint
81k
1
vote
1
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223
views
Comment:
Comment: Is it possible to see so little adipocyte in white adipose tissue?
updated 2 days ago by
Ram
43k • written 3 days ago by
ATpoint
81k
0
votes
0
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186
views
Comment:
Comment: Fpkm and log2fold change and pcr validation
3 days ago by
ATpoint
81k
1
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0
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226
views
Comment:
Comment: Deseq generating warning "the model matrix is not full rank"
3 days ago by
ATpoint
81k
0
votes
1
reply
206
views
Answer:
Answer: Using velocyto on 3'UTR 10x single-cell RNA-Seq data
3 days ago by
ATpoint
81k
0
votes
1
reply
200
views
Comment:
Comment: how to run limma for large datasets
4 days ago by
ATpoint
81k
1
vote
0
replies
170
views
Answer:
Answer: Can I use this community for software development?
4 days ago by
ATpoint
81k
0
votes
0
replies
496
views
Answer:
Answer: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
7 days ago by
ATpoint
81k
1
vote
1
reply
461
views
Comment:
Comment: Quest about the input data for PCA analysis
8 days ago by
ATpoint
81k
0
votes
0
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159
views
Comment:
Comment: Adding gene to GRange objects with single base
8 days ago by
ATpoint
81k
2
votes
0
replies
209
views
Comment:
Comment: Disease Prevalence Database/Disease Incidence Database
8 days ago by
ATpoint
81k
1
vote
1
reply
261
views
Answer:
Answer: How to visualize scRNA-seq normalized data
8 days ago by
ATpoint
81k
2
votes
1
reply
223
views
Answer:
Answer: Infering the cell composition from bulk RNA-seq data for mouse
9 days ago by
ATpoint
81k
0
votes
1
reply
202
views
Answer:
Answer: Gene set to perform GSVA
9 days ago by
ATpoint
81k
1
vote
1
reply
276
views
Answer:
Answer: Length by gene from salmon
9 days ago by
ATpoint
81k
1
vote
1
reply
545
views
Comment:
Comment: Applicability of the SoupX ambient mRNA decontamination technique to fixed and/o
10 days ago by
ATpoint
81k
1
vote
1
reply
405
views
Comment:
Comment: Single cluster spanning in different locations in UMAP in scRNAseq data
10 days ago by
ATpoint
81k
0
votes
0
replies
330
views
Comment:
Comment: scRNAseq normalization
10 days ago by
ATpoint
81k
1
vote
1
reply
330
views
Answer:
Answer: scRNAseq normalization
10 days ago by
ATpoint
81k
0
votes
1
reply
255
views
Comment:
Comment: Average expression of a sample in single-cell data
11 days ago by
ATpoint
81k
0
votes
1
reply
706
views
Comment:
Comment: t-test in two groups, multiple rows
11 days ago by
ATpoint
81k
0
votes
1
reply
496
views
Comment:
Comment: calculating mean fragment length from CollectInsertSizeMetrics(Picard) output
11 days ago by
ATpoint
81k
0
votes
1
reply
197
views
Comment:
Comment: FASTA/FASTQ files of fetal Aneuploids
11 days ago by
ATpoint
81k
0
votes
0
replies
1.4k
views
Comment:
Comment: sam.gz files to bam using samtools
11 days ago by
ATpoint
81k
0
votes
2
replies
706
views
Comment:
Comment: t-test in two groups, multiple rows
11 days ago by
ATpoint
81k
2
votes
0
replies
243
views
Answer:
Answer: Compute p-value, having log fold change
12 days ago by
ATpoint
81k
1
vote
1
reply
247
views
Comment:
Comment: What GC content should I expect?
12 days ago by
ATpoint
81k
2
votes
1
reply
706
views
Answer:
Answer: t-test in two groups, multiple rows
14 days ago by
ATpoint
81k
2
votes
1
reply
319
views
Answer:
Answer: With DESeq2 "Not full rank" Error with design
14 days ago by
ATpoint
81k
0
votes
0
replies
217
views
Answer:
Answer: Seeking Advice on Pre-processing Single Cell Data for Gene Mapping
14 days ago by
ATpoint
81k
0
votes
0
replies
684
views
Comment:
Comment: Using aspera-connect to UPLOAD fastq files to ENA on Linux
15 days ago by
ATpoint
81k
0
votes
1
reply
684
views
Comment:
Comment: Using aspera-connect to UPLOAD fastq files to ENA on Linux
15 days ago by
ATpoint
81k
0
votes
0
replies
133
views
Comment:
Comment: Calculating (Groupwise) Log2fold change using values obtained from SST-RMA?
15 days ago by
ATpoint
81k
0
votes
0
replies
195
views
Answer:
Answer: GENERAL R QUESTION: Accessing package versions of an old R object/project?
15 days ago by
ATpoint
81k
1
vote
0
replies
374
views
Comment:
Comment: UMI_extract for paired end reads of micro_RNA
16 days ago by
ATpoint
81k
1
vote
1
reply
271
views
Comment:
Comment: Some questions about bulk RNA-seq data normalization
17 days ago by
ATpoint
81k
0
votes
1
reply
271
views
Comment:
Comment: Some questions about bulk RNA-seq data normalization
17 days ago by
ATpoint
81k
2
votes
0
replies
315
views
Answer:
Answer: Demonstrating lack of difference between two peaksets
18 days ago by
ATpoint
81k
2
votes
0
replies
143
views
Comment:
Comment: Computing the neighborhood graph in single cell pipeline
18 days ago by
ATpoint
81k
0
votes
1
reply
234
views
Comment:
Comment: How to get genes in a gene set in msigdb?
18 days ago by
ATpoint
81k
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