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Answer: Answer: DSEQ2 analysis
14 days ago by ATpoint 82k
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314
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Comment: Comment: Does comparing two different groups to a common third group introduce bias in th
14 days ago by ATpoint 82k
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340
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
15 days ago by ATpoint 82k
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1
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375
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Answer: Answer: What analysis suitable to identify similarly expressed genes between two samples
15 days ago by ATpoint 82k
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340
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
15 days ago by ATpoint 82k
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290
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Comment: Comment: Odd alignment question/finding
15 days ago by ATpoint 82k
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356
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Comment: Comment: DESeq2 processing problems
16 days ago by ATpoint 82k
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1
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225
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Answer: Answer: MA plot of shrunken fold change
17 days ago by ATpoint 82k
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913
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Answer: Answer: High Malat-1 expression in single cell data
18 days ago by ATpoint 82k
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193
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Comment: Comment: Longitudinal analysis of subpopulations: which approach is better?
18 days ago by ATpoint 82k
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377
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Comment: Comment: How to assign cell types after integration in scRNA
19 days ago by ATpoint 82k
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346
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Answer: Answer: ChIP-seq datasets: input samples omitted?
19 days ago by ATpoint 82k
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377
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Comment: Comment: How to assign cell types after integration in scRNA
19 days ago by ATpoint 82k
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2.2k
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Comment: Comment: NGS forensics: how to know if data is fabricated
20 days ago by ATpoint 82k
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439
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Answer: Answer: Source other conda environments in a nextflow pipeline when nextflow itself is i
21 days ago by ATpoint 82k
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450
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Comment: Comment: PCA plot
21 days ago by ATpoint 82k
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3.8k
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Comment: Comment: Treatment VS Control in Single Cell RNAseq analysis
22 days ago by ATpoint 82k
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268
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Comment: Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
22 days ago by ATpoint 82k
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368
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Answer: Answer: Sequence read length shorter than flow cell specification
22 days ago by ATpoint 82k
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415
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Comment: Comment: Highest variable features in single cell data
22 days ago by ATpoint 82k
2
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605
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Comment: Comment: To get p-values for the TPM
23 days ago by ATpoint 82k
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414
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Comment: Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
24 days ago by ATpoint 82k
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428
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
24 days ago by ATpoint 82k
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328
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Answer: Answer: Gene set enrichment analysis differences between 2020 and 2024
25 days ago by ATpoint 82k
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164
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Comment: Comment: Displaced fragment length distribution in ATAC-seq
25 days ago by ATpoint 82k
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350
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Comment: Comment: Per base sequence content error in RNAseq analysis
25 days ago by ATpoint 82k
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414
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Answer: Answer: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
25 days ago by ATpoint 82k
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1
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350
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Answer: Answer: Per base sequence content error in RNAseq analysis
25 days ago by ATpoint 82k
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0
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622
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Answer: Answer: how to find genes that are significantly expressed in brain cortex samples
27 days ago by ATpoint 82k
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2.0k
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Comment: Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
27 days ago by ATpoint 82k
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1.4k
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Comment: Comment: Cellranger count error: Input FASTQ file ended prematurely
27 days ago by ATpoint 82k
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324
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Comment: Comment: Could you please assist in identifying this cluster?
28 days ago by ATpoint 82k
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5.3k
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Comment: Comment: Memory usage of picard Samsort
28 days ago by ATpoint 82k
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308
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Answer: Answer: DEseq2
29 days ago by ATpoint 82k
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0
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566
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
4 weeks ago by ATpoint 82k
2
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0
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357
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Comment: Comment: Bwa sampe - BGI
4 weeks ago by ATpoint 82k
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426
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Comment: Comment: Ensembl gene id conversion
4 weeks ago by ATpoint 82k
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1
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427
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Answer: Answer: Which experiments generate Position Frequency Matrix?
4 weeks ago by ATpoint 82k
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1
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308
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Comment: Comment: Statistical Advice Needed for RNAseq Data Analysis
4 weeks ago by ATpoint 82k
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1
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318
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
4 weeks ago by ATpoint 82k
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250
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Comment: Comment: Error in edgeR/Deseq2 Analysis
4 weeks ago by ATpoint 82k
2
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1
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429
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Answer: Answer: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul
4 weeks ago by ATpoint 82k
3
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2
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393
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Answer: Answer: I'm new to cell ranger. Can single cells prepared with a protocol other than the
4 weeks ago by ATpoint 82k
1
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0
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457
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Comment: Comment: Deseq2 : Paired analysis or otherwise
4 weeks ago by ATpoint 82k
0
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1
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24k
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Comment: Comment: Gene Set Enrichment Analysis
4 weeks ago by ATpoint 82k
1
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1
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457
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Answer: Answer: Deseq2 : Paired analysis or otherwise
4 weeks ago by ATpoint 82k
0
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0
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391
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
4 weeks ago by ATpoint 82k
1
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287
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Answer: Answer: How to handle more than 1 SRA Run per Experiment?
4 weeks ago by ATpoint 82k
1
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306
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
5 weeks ago by ATpoint 82k
0
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1
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367
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Comment: Comment: Questions about transfering wgs file to reference genome file
5 weeks ago by ATpoint 82k
9,729 results • Page 2 of 195
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