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Comment: Comment: Does comparing two different groups to a common third group introduce bias in th
1 hour ago by ATpoint 82k
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206
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
20 hours ago by ATpoint 82k
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134
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Answer: Answer: What analysis suitable to identify similarly expressed genes between two samples
20 hours ago by ATpoint 82k
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206
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Comment: Comment: Problem with data downloaded from Short Reads Archive (SRA)
22 hours ago by ATpoint 82k
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162
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Comment: Comment: Odd alignment question/finding
1 day ago by ATpoint 82k
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110
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Comment: Comment: How to perform single cell multimodal integration using Seurat for Geo datasets
1 day ago by ATpoint 82k
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278
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Comment: Comment: DESeq2 processing problems
1 day ago by ATpoint 82k
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184
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Answer: Answer: MA plot of shrunken fold change
3 days ago by ATpoint 82k
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291
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Answer: Answer: High Malat-1 expression in single cell data
3 days ago by ATpoint 82k
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151
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Comment: Comment: Longitudinal analysis of subpopulations: which approach is better?
3 days ago by ATpoint 82k
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296
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Comment: Comment: How to assign cell types after integration in scRNA
4 days ago by ATpoint 82k
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290
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Answer: Answer: ChIP-seq datasets: input samples omitted?
4 days ago by ATpoint 82k
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296
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Comment: Comment: How to assign cell types after integration in scRNA
5 days ago by ATpoint 82k
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1.9k
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Comment: Comment: NGS forensics: how to know if data is fabricated
5 days ago by ATpoint 82k
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360
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Answer: Answer: Source other conda environments in a nextflow pipeline when nextflow itself is i
6 days ago by ATpoint 82k
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374
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Comment: Comment: PCA plot
6 days ago by ATpoint 82k
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3.7k
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Comment: Comment: Treatment VS Control in Single Cell RNAseq analysis
7 days ago by ATpoint 82k
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226
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Comment: Comment: Normalize scRNAseq data to housekeeping genes to compare several datasets
7 days ago by ATpoint 82k
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303
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Answer: Answer: Sequence read length shorter than flow cell specification
7 days ago by ATpoint 82k
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301
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Comment: Comment: Highest variable features in single cell data
8 days ago by ATpoint 82k
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495
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Comment: Comment: To get p-values for the TPM
8 days ago by ATpoint 82k
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344
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Comment: Comment: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
9 days ago by ATpoint 82k
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348
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Comment: Comment: Should I remove unlocalized scaffols in reference genome before alignment?
9 days ago by ATpoint 82k
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285
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Answer: Answer: Gene set enrichment analysis differences between 2020 and 2024
10 days ago by ATpoint 82k
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137
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Comment: Comment: Displaced fragment length distribution in ATAC-seq
10 days ago by ATpoint 82k
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303
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Comment: Comment: Per base sequence content error in RNAseq analysis
10 days ago by ATpoint 82k
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344
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Answer: Answer: What is the real meaning of relative enrichment/peak height of ChIP-seq tracks?
10 days ago by ATpoint 82k
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1
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303
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Answer: Answer: Per base sequence content error in RNAseq analysis
11 days ago by ATpoint 82k
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567
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Answer: Answer: how to find genes that are significantly expressed in brain cortex samples
12 days ago by ATpoint 82k
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1.4k
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Comment: Comment: Installing/switching between versions of R/Rstudio/Bioconductor on personal mach
12 days ago by ATpoint 82k
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1.3k
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Comment: Comment: Cellranger count error: Input FASTQ file ended prematurely
13 days ago by ATpoint 82k
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301
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Comment: Comment: Could you please assist in identifying this cluster?
13 days ago by ATpoint 82k
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5.3k
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Comment: Comment: Memory usage of picard Samsort
13 days ago by ATpoint 82k
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292
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Answer: Answer: DEseq2
14 days ago by ATpoint 82k
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504
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
16 days ago by ATpoint 82k
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315
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Comment: Comment: Bwa sampe - BGI
16 days ago by ATpoint 82k
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380
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Comment: Comment: Ensembl gene id conversion
16 days ago by ATpoint 82k
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396
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Answer: Answer: Which experiments generate Position Frequency Matrix?
16 days ago by ATpoint 82k
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281
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Comment: Comment: Statistical Advice Needed for RNAseq Data Analysis
16 days ago by ATpoint 82k
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293
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Comment: Comment: Can I compare kallisto counts from samples with different amount of reads?
16 days ago by ATpoint 82k
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233
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Comment: Comment: Error in edgeR/Deseq2 Analysis
16 days ago by ATpoint 82k
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406
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Answer: Answer: I am new to single cell analysis. Can RNA velocity (spliced/unspliced) be calcul
16 days ago by ATpoint 82k
3
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2
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349
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Answer: Answer: I'm new to cell ranger. Can single cells prepared with a protocol other than the
17 days ago by ATpoint 82k
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412
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Comment: Comment: Deseq2 : Paired analysis or otherwise
17 days ago by ATpoint 82k
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23k
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Comment: Comment: Gene Set Enrichment Analysis
19 days ago by ATpoint 82k
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412
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Answer: Answer: Deseq2 : Paired analysis or otherwise
19 days ago by ATpoint 82k
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0
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341
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Comment: Comment: 10x GEX and ADT data analysis in Seurat
20 days ago by ATpoint 82k
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271
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Answer: Answer: How to handle more than 1 SRA Run per Experiment?
20 days ago by ATpoint 82k
1
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286
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Comment: Comment: DepMap: siRNA and CRSIPR discrepancy
21 days ago by ATpoint 82k
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1
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337
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Comment: Comment: Questions about transfering wgs file to reference genome file
21 days ago by ATpoint 82k
9,679 results • Page 1 of 194
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