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Comment:
Comment: NGS forensics: how to know if data is fabricated
5 days ago by
benformatics
3.9k
2
votes
0
replies
1.9k
views
Comment:
Comment: NGS forensics: how to know if data is fabricated
5 days ago by
benformatics
3.9k
1
vote
0
replies
14k
views
Answer:
Answer: How Can We Find The Info For 3'Utr And 5'Utr In Gencode Gtf File?
8 days ago by
benformatics
3.9k
1
vote
0
replies
226
views
Answer:
Answer: Exon often targeted by mobile element insertions?
11 weeks ago by
benformatics
3.9k
0
votes
0
replies
293
views
GATK SelectVariants --remove-unused-alternates dropping real INDELs?
GATK
5 months ago by
benformatics
3.9k
0
votes
0
replies
496
views
Comment:
Comment: STAR GeneCounts for most genes are 0
5 months ago by
benformatics
3.9k
2
votes
1
reply
816
views
Answer:
Answer: Paired-end RNA seq (NextSeq2000): 1-3% if R2 reads are only contain G bases
6 months ago by
benformatics
3.9k
0
votes
0
replies
513
views
Comment:
Comment: unbiased clustering of these top 50 genes in seurat
6 months ago by
benformatics
3.9k
0
votes
0
replies
467
views
Answer:
Answer: How to plot two categorical variables in ggridges?
6 months ago by
benformatics
3.9k
1
vote
0
replies
467
views
Comment:
Comment: How to plot two categoric variables in ggridges?
6 months ago by
benformatics
3.9k
1
vote
1
reply
1.2k
views
Answer:
Answer: Map genome positions onto protein coordinates?
6 months ago by
benformatics
3.9k
1
vote
0
replies
555
views
Answer:
Answer: Get discordant read pairs from bam
7 months ago by
benformatics
3.9k
1
vote
1
reply
3.5k
views
Comment:
Comment: Why should ATAC-seq mapped reads be shifted +4 and -5 for +strand and -strand, r
7 months ago by
benformatics
3.9k
1
vote
1
reply
1.4k
views
Answer:
Answer: Discussion: Uploading terrabytes of data to NCBI SRA
8 months ago by
benformatics
3.9k
1
vote
0
replies
720
views
Answer:
Answer: insert size in bam file do not make sense
9 months ago by
benformatics
3.9k
5
votes
0
replies
1.2k
views
Answer:
Answer: How to import a gtf file in R so that it appears in tabular format as if it were
9 months ago by
benformatics
3.9k
1
vote
1
reply
487
views
Comment:
Comment: Assigning cell types to cells based on expression of cell surface markers
9 months ago by
benformatics
3.9k
0
votes
0
replies
855
views
Answer:
Answer: How to label clusters from a UMAP
9 months ago by
benformatics
3.9k
1
vote
0
replies
726
views
Comment:
Comment: Identify Alternative Splicing Event using exon and junction count table
9 months ago by
benformatics
3.9k
0
votes
1
reply
2.3k
views
Answer:
Answer: Remove short sequences with length < 50% from a multi-fasta file
9 months ago by
benformatics
3.9k
1
vote
0
replies
1.4k
views
Answer:
Answer: I want to rename sequence headers
updated 9 months ago by
Ram
43k • written 9 months ago by
benformatics
3.9k
0
votes
1
reply
1.0k
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
9 months ago by
benformatics
3.9k
1
vote
1
reply
1.0k
views
Comment:
Comment: Contig labels in BAM off by 1, how do I fix it?
10 months ago by
benformatics
3.9k
0
votes
0
replies
1.9k
views
Comment:
Comment: monocle single cell differential expression: error message for HSMM <- estimateD
10 months ago by
benformatics
3.9k
0
votes
1
reply
998
views
Comment:
Comment: gene id
10 months ago by
benformatics
3.9k
0
votes
1
reply
998
views
Comment:
Comment: gene id
10 months ago by
benformatics
3.9k
0
votes
0
replies
549
views
Answer:
Answer: 3' Single Cell RNA Seq Reads mapping to promoter region of gene
10 months ago by
benformatics
3.9k
0
votes
0
replies
953
views
Comment:
Comment: Analize RNA-seq data using Hisat2
10 months ago by
benformatics
3.9k
1
vote
0
replies
728
views
Comment:
Comment: Filtering mitochondrial reads from ATAC-Seq aligned reads- what to do with reads
11 months ago by
benformatics
3.9k
1
vote
0
replies
701
views
Comment:
Comment: Is the gene-specific PCR efficiency a serious concern for intrasample comparison
11 months ago by
benformatics
3.9k
0
votes
1
reply
1.0k
views
Comment:
Comment: error in Genome Mepping by BWA tools in Linux
12 months ago by
benformatics
3.9k
2
votes
0
replies
683
views
Answer:
Answer: Fastqs different lanes
12 months ago by
benformatics
3.9k
0
votes
0
replies
687
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
12 months ago by
benformatics
3.9k
0
votes
0
replies
1.1k
views
Comment:
Comment: How do I project known tSNE coordinates onto SeuratObject
12 months ago by
benformatics
3.9k
1
vote
1
reply
1.1k
views
Answer:
Answer: How do I project known tSNE coordinates onto SeuratObject
12 months ago by
benformatics
3.9k
0
votes
1
reply
687
views
Comment:
Comment: Chance that DNA with 3N nucleotide encodes 2 protein with size of N amino-acids
12 months ago by
benformatics
3.9k
0
votes
1
reply
4.4k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by
benformatics
3.9k
1
vote
1
reply
4.4k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by
benformatics
3.9k
0
votes
0
replies
972
views
Comment:
Comment: Remove string from Seurat object metadata
12 months ago by
benformatics
3.9k
0
votes
1
reply
972
views
Answer:
Answer: Remove string from Seurat object metadata
12 months ago by
benformatics
3.9k
1
vote
1
reply
4.4k
views
Comment:
Comment: I want to correct the erroneous barcode file, and the Python code that I've writ
12 months ago by
benformatics
3.9k
0
votes
1
reply
4.5k
views
Comment:
Comment: What are the advantages of using the T2T as a reference vs GRCh38 today?
12 months ago by
benformatics
3.9k
0
votes
0
replies
563
views
Comment:
Comment: Merged BAM has more reads than sum of parts
12 months ago by
benformatics
3.9k
0
votes
1
reply
1.5k
views
Comment:
Comment: Can you swap reference genome releases ?
13 months ago by
benformatics
3.9k
0
votes
0
replies
634
views
Comment:
Comment: Non-zero expression counts from deleted genes
13 months ago by
benformatics
3.9k
0
votes
0
replies
743
views
Comment:
Comment: R script error R aborted or encountered a fatal error
13 months ago by
benformatics
3.9k
0
votes
1
reply
634
views
Comment:
Comment: Non-zero expression counts from deleted genes
13 months ago by
benformatics
3.9k
0
votes
0
replies
756
views
Answer:
Answer: divide coordinates into equal number of bins
13 months ago by
benformatics
3.9k
0
votes
0
replies
829
views
Answer:
Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
13 months ago by
benformatics
3.9k
1
vote
0
replies
1.2k
views
Answer:
Answer: Recommendation for (Alternative) Splicing analysis packages for bulk RNA-seq da
13 months ago by
benformatics
3.9k
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