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0
votes
0
replies
2.3k
views
Comment:
C: Variant Calling output problem GL000 contigs
8.1 years ago by
morovatunc
▴ 550
0
votes
1
reply
2.3k
views
Comment:
C: Variant Calling output problem GL000 contigs
8.1 years ago by
morovatunc
▴ 550
0
votes
2
replies
2.3k
views
Variant Calling output problem GL000 contigs
mutect
vardict
varscan
freebayes
8.1 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.2k
views
Comment:
C: HOMER mergepeaks matrix interpreatation
8.1 years ago by
morovatunc
▴ 550
0
votes
2
replies
2.2k
views
Comment:
C: HOMER mergepeaks matrix interpreatation
8.1 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.6k
views
Comment:
C: CRISPR screen 0 count values
8.1 years ago by
morovatunc
▴ 550
1
vote
2
replies
1.6k
views
CRISPR screen 0 count values
CRISPR-Screen
8.1 years ago by
morovatunc
▴ 550
0
votes
0
replies
6.7k
views
Comment:
C: New to BEDtools, can't get intersect to work
8.1 years ago by
morovatunc
▴ 550
1
vote
1
reply
6.7k
views
Comment:
C: New to BEDtools, can't get intersect to work
8.1 years ago by
morovatunc
▴ 550
1
vote
1
reply
6.7k
views
Answer:
A: New to BEDtools, can't get intersect to work
8.1 years ago by
morovatunc
▴ 550
1
vote
0
replies
1.0k
views
Predicting gene expression of a cancer from the expression of subset
RNA-Seq
8.1 years ago by
morovatunc
▴ 550
0
votes
1
reply
10k
views
Comment:
C: Kallisto New RNA-seq quantification method discussion
8.1 years ago by
morovatunc
▴ 550
0
votes
1
reply
10k
views
Comment:
C: Kallisto New RNA-seq quantification method discussion
8.1 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.7k
views
HOMER mergePeaks --matrix output?
ChIP-Seq
8.1 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.8k
views
Comment:
C: Interpreting 2 RNA-seq data with different lengths
8.2 years ago by
morovatunc
▴ 550
0
votes
1
reply
1.8k
views
Comment:
C: Interpreting 2 RNA-seq data with different lengths
8.2 years ago by
morovatunc
▴ 550
1
vote
4
replies
1.8k
views
Interpreting 2 RNA-seq data with different lengths
RNA-Seq
DEseq
updated 8.2 years ago by
andrew.j.skelton73
6.6k • written 8.2 years ago by
morovatunc
▴ 550
0
votes
1
reply
2.4k
views
VarDictJava BED file input Problem
VarDict
WGS
updated 2.7 years ago by
Ram
43k • written 8.3 years ago by
morovatunc
▴ 550
0
votes
2
replies
3.0k
views
TCGA RNAseq normal and tumor samples problem
RNA-Seq
TCGA
updated 8.2 years ago by
Charles Warden
8.2k • written 8.2 years ago by
morovatunc
▴ 550
0
votes
1
reply
4.5k
views
Answer:
A: Making a mac book Bioinfo ready (El Capitan)
8.2 years ago by
morovatunc
▴ 550
0
votes
1
reply
3.7k
views
Comment:
Comment: ICGC Variant Calling Pipelines
updated 22 months ago by
Ram
43k • written 8.2 years ago by
morovatunc
▴ 550
8
votes
4
replies
3.7k
views
ICGC Variant Calling Pipelines
Mutation-Calling
ICGC
updated 22 months ago by
Ram
43k • written 8.2 years ago by
morovatunc
▴ 550
1
vote
1
reply
6.5k
views
Comment:
C: Chip-Seq Peak hight difference between BED and BW file formats.
8.3 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.9k
views
Comment:
C: About Dream Challenge Somatic Mutation Calling Algorithms
8.3 years ago by
morovatunc
▴ 550
0
votes
2
replies
1.9k
views
About Dream Challenge Somatic Mutation Calling Algorithms
Somatic-Mutations
SNV
DREAM
updated 22 months ago by
Ram
43k • written 8.3 years ago by
morovatunc
▴ 550
0
votes
0
replies
9.0k
views
Comment:
C: HOMER find motifs from BED data
8.4 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.4k
views
HOMER mergePeaks -d value definition
ChIP-Seq
HOMER
updated 21 months ago by
Ram
43k • written 8.4 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.0k
views
Comment:
C: Eland format to Bed format?
8.4 years ago by
morovatunc
▴ 550
1
vote
2
replies
2.0k
views
Eland format to Bed format?
ChIP-Seq
GEO
BED
updated 21 months ago by
Ram
43k • written 8.4 years ago by
morovatunc
▴ 550
0
votes
4
replies
3.3k
views
Homer mergePeaks : Cannot calculate the mean of overlapped peaks
ChIP-Seq
Homer
updated 21 months ago by
Ram
43k • written 8.4 years ago by
morovatunc
▴ 550
0
votes
0
replies
5.6k
views
Answer:
A: liftOver error: not reading the coordinate position correctly?
8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.7k
views
Comment:
C: What is the best way to start coding genomics tools?
8.5 years ago by
morovatunc
▴ 550
1
vote
4
replies
1.7k
views
Forum:
What is the best way to start coding genomics tools?
python
indel
genomic-tools
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
6.8k
views
Comment:
C: Finding Chip Seq Overlaps with Bed files
8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
6.8k
views
Comment:
Comment: Finding Chip Seq Overlaps with Bed files
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.4k
views
Comment:
Comment: What statistical test should I apply to prove my high confidence values are part
8.5 years ago by
morovatunc
▴ 550
1
vote
6
replies
2.4k
views
What statistical test should I apply to prove my high confidence values are part of low confidence values?
chip-seq
bed
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.0k
views
Comment:
C: Differential Gene Expression Analysis with NimbleGen microarrays
8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
1.6k
views
CGhub Whole Genome Sequencing Data sequencing info
WGS
cghub
TGCA
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
0
votes
1
reply
2.0k
views
Answer:
A: Differential Gene Expression Analysis with NimbleGen microarrays
8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.1k
views
CrossMap Genome Coordinate Converter, Start Location is further than End location Problem
hg18
crossmap
genome-coordinates
hg19
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
2
votes
8
replies
2.7k
views
multiIntersectBed How can I implement chip seq peak values with the overlaps?
ChIP-Seq
bedtools
updated 21 months ago by
Ram
43k • written 8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
9.3k
views
Comment:
C: Overlapping And Unique Peaks In Chipseq
8.5 years ago by
morovatunc
▴ 550
0
votes
0
replies
4.2k
views
Comment:
C: IGV peak Visualation Problem
8.6 years ago by
morovatunc
▴ 550
0
votes
1
reply
3.0k
views
Comment:
C: Chip Seq Peaks/ Enrichment Profilig?
8.6 years ago by
morovatunc
▴ 550
2
votes
5
replies
3.0k
views
Chip Seq Peaks/ Enrichment Profilig?
next-gen
ChIP-Seq
seq
updated 20 months ago by
Ram
43k • written 8.6 years ago by
morovatunc
▴ 550
0
votes
0
replies
3.1k
views
Comment:
Comment: Chipseq Data On Prostate Cancer
updated 20 months ago by
Ram
43k • written 8.6 years ago by
morovatunc
▴ 550
0
votes
0
replies
2.1k
views
Comment:
C: about editing SAM/BAM files
8.6 years ago by
morovatunc
▴ 550
6
votes
4
replies
2.1k
views
about editing SAM/BAM files
bam
sam
updated 20 months ago by
Ram
43k • written 8.7 years ago by
morovatunc
▴ 550
0
votes
0
replies
6.1k
views
Answer:
A: [Beginner] Introduction to bioinformatics file types
8.7 years ago by
morovatunc
▴ 550
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