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Showing :
answers
1
vote
0
replies
5.4k
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Answer:
A: Need clarity on the concept of germline mutations
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
2
votes
0
replies
3.5k
views
Answer:
A: Questions about BreakDancer
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
5
votes
2
replies
6.9k
views
Answer:
A: list of gene or transcript IDs and their length
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
0
votes
0
replies
3.4k
views
Answer:
A: get deletion coverage from .bam file
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
0
votes
0
replies
2.1k
views
Answer:
A: Export of SNP data from 1000Genomes for several hundred genes
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
0
votes
0
replies
5.1k
views
Answer:
A: running trimmomatic 0.35
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
3
votes
0
replies
2.4k
views
Answer:
A: Methods of classifying, not detecting, structural variation?
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
trausch
★ 1.9k
1
vote
0
replies
2.6k
views
Answer:
A: Sanger sequencing data analysis
4.4 years ago by
trausch
★ 1.9k
0
votes
0
replies
1.1k
views
Answer:
A: Fusion orientation make sense or not
4.4 years ago by
trausch
★ 1.9k
1
vote
0
replies
2.4k
views
Answer:
A: Any suggestion for sanger sequencing result editing
4.5 years ago by
trausch
★ 1.9k
4
votes
0
replies
2.4k
views
Answer:
A: BWA Mem -M flag (mark split hits) effect on structural variation calling
4.5 years ago by
trausch
★ 1.9k
0
votes
0
replies
561
views
Answer:
A: Checking quality of predesigned probes for multiplex qPCR
4.6 years ago by
trausch
★ 1.9k
0
votes
0
replies
2.3k
views
Answer:
A: VariantCalling with single sanger read
4.7 years ago by
trausch
★ 1.9k
0
votes
0
replies
3.0k
views
Answer:
A: Indels by Sanger
4.7 years ago by
trausch
★ 1.9k
1
vote
1
reply
2.4k
views
Answer:
A: Options for cell type deconvolution from whole blood?
4.8 years ago by
trausch
★ 1.9k
3
votes
0
replies
1.3k
views
Answer:
A: number of cycles, Nextseq500, for whole exoems equencing, which option is more e
4.8 years ago by
trausch
★ 1.9k
0
votes
0
replies
1.8k
views
Answer:
A: How to align paired-end Sanger sequences
4.8 years ago by
trausch
★ 1.9k
0
votes
0
replies
2.0k
views
Answer:
A: Export Coverage on IGV
4.9 years ago by
trausch
★ 1.9k
1
vote
0
replies
3.1k
views
Answer:
A: Calculating dinucleotide frequencies for each sequence in a multi fasta file
5.0 years ago by
trausch
★ 1.9k
1
vote
1
reply
1.7k
views
Answer:
A: Graphing GC Bias in Sequence Capture
5.0 years ago by
trausch
★ 1.9k
2
votes
0
replies
1.9k
views
Answer:
A: Comparing metrics of two exome: how to interpret higher median coverage but lowe
5.0 years ago by
trausch
★ 1.9k
2
votes
0
replies
34k
views
Answer:
A: Generating consensus sequence from bam file
5.0 years ago by
trausch
★ 1.9k
1
vote
1
reply
4.5k
views
Answer:
C: ATAC-seq : which read length?
5.2 years ago by
trausch
★ 1.9k
0
votes
0
replies
1.5k
views
Answer:
A: Genotyping diploid organisms from Sanger AB1 files
5.2 years ago by
trausch
★ 1.9k
1
vote
1
reply
1.6k
views
Answer:
A: Validate PCR DNA primers against whole de novel genome
5.2 years ago by
trausch
★ 1.9k
1
vote
0
replies
3.4k
views
Answer:
C: Exome Seq tutorial
5.3 years ago by
trausch
★ 1.9k
1
vote
0
replies
2.9k
views
Answer:
A: Merging peak files for unionized set
5.3 years ago by
trausch
★ 1.9k
1
vote
1
reply
3.4k
views
Answer:
A: Get genotype GT from multi-sample VCF (per chromosome)
5.5 years ago by
trausch
★ 1.9k
2
votes
1
reply
3.0k
views
Answer:
A: find coverage of specific exomes from a bam file
5.5 years ago by
trausch
★ 1.9k
1
vote
0
replies
3.8k
views
Answer:
A: Majority consensus from bam file
5.6 years ago by
trausch
★ 1.9k
0
votes
1
reply
2.3k
views
Answer:
A: Other then picard better way to calculate insertmetrics from a bam file ?
5.6 years ago by
trausch
★ 1.9k
0
votes
0
replies
949
views
Answer:
A: DNA sequences from the origins of replication.
5.6 years ago by
trausch
★ 1.9k
1
vote
0
replies
1.6k
views
Answer:
A: Human CNV VCF for Trios from whole-genomes
5.7 years ago by
trausch
★ 1.9k
1
vote
1
reply
1.6k
views
Answer:
A: Identification of break points for a balanced translocation
5.7 years ago by
trausch
★ 1.9k
0
votes
0
replies
1.5k
views
Answer:
A: calculate haloplex coverage
5.7 years ago by
trausch
★ 1.9k
1
vote
0
replies
2.8k
views
Answer:
A: Normalising RNA-seq samples from bam files for UCSC Genome browser visualization
5.8 years ago by
trausch
★ 1.9k
2
votes
0
replies
12k
views
Answer:
A: AB1 to FASTQ
5.8 years ago by
trausch
★ 1.9k
7
votes
3
replies
11k
views
Answer:
C: Mismatch and Indel statistics from BAM/SAM file
5.8 years ago by
trausch
★ 1.9k
0
votes
0
replies
5.6k
views
Answer:
A: Detecting Homozygous Insertion from Sanger Seq
5.8 years ago by
trausch
★ 1.9k
0
votes
0
replies
2.0k
views
Answer:
A: RNA-seq : Quantification problem after mapped with BBMap
5.8 years ago by
trausch
★ 1.9k
6
votes
1
reply
5.1k
views
Answer:
A: Get trace data for all four bases from ab1 file
5.9 years ago by
trausch
★ 1.9k
1
vote
0
replies
3.4k
views
Answer:
A: Splice junction sites and number of splitted reads from STAR aligned bam
5.9 years ago by
trausch
★ 1.9k
2
votes
0
replies
13k
views
Answer:
A: ATAC-seq DE analysis
5.9 years ago by
trausch
★ 1.9k
3
votes
2
replies
2.2k
views
Answer:
A: Add AF from 1000 genomes vcf file to a different vcf file
6.0 years ago by
trausch
★ 1.9k
1
vote
0
replies
6.7k
views
Answer:
A: calculate ti/tv ratio in WGS data
6.0 years ago by
trausch
★ 1.9k
2
votes
0
replies
14k
views
Answer:
A: bam file to .bedgraph
6.1 years ago by
trausch
★ 1.9k
0
votes
0
replies
2.6k
views
Answer:
A: How to normalize the bam files for RNA-Seq samples for visualization
6.1 years ago by
trausch
★ 1.9k
1
vote
0
replies
2.8k
views
Answer:
A: Calculating coverage on a list of individual genes in WES data?
6.3 years ago by
trausch
★ 1.9k
1
vote
1
reply
4.2k
views
Answer:
A: How to get counts data for allele specific expression analysis (ASE) from aligne
6.3 years ago by
trausch
★ 1.9k
3
votes
0
replies
1.7k
views
Answer:
A: Number of individuals in 1000genomes superpopulations?
6.3 years ago by
trausch
★ 1.9k
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