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413
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Comment: Comment: Why do I get DE non-polyadenylated genes in a RNAseq with PoliA library?
3 months ago by i.sudbery 19k
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259
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Answer: Answer: Differential Abundance between samples
3 months ago by i.sudbery 19k
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1.6k
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Answer: Answer: GOSeq gene ontology enrichment analysis in rice
3 months ago by i.sudbery 19k
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1.6k
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Comment: Comment: GOSeq gene ontology enrichment analysis in rice
3 months ago by i.sudbery 19k
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0
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207
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Answer: Answer: Batch correction for eQTL analysis
3 months ago by i.sudbery 19k
6
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1
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995
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Answer: Answer: How to overcome the imposter syndrome in bioinformatics?
3 months ago by i.sudbery 19k
2
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1
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1.4k
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Answer: Answer: How to speed Salmon index up
3 months ago by i.sudbery 19k
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
2
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
0
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1
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
0
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657
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Answer: Answer: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
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0
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657
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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1
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657
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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2
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657
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Comment: Comment: UMI-tools no tsv files at deduplication
3 months ago by i.sudbery 19k
0
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
1
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0
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2.1k
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Comment: Comment: Determining computer time required
3 months ago by i.sudbery 19k
1
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1
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2.1k
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Comment: Comment: Determining computer time required
updated 3 months ago by 43k • written 3 months ago by 19k
6
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1
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2.1k
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Answer: Answer: Determining computer time required
3 months ago by i.sudbery 19k
0
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0
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795
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Comment: Comment: How to get enhancer regions
3 months ago by i.sudbery 19k
0
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0
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397
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Comment: Comment: isoformSwithAnalyzeR importRdata error
3 months ago by i.sudbery 19k
0
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2
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397
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Comment: Comment: isoformSwithAnalyzeR importRdata error
3 months ago by i.sudbery 19k
0
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0
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586
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Comment: Comment: Bulk RNA-seq: Different Expression Analysis with DEseq2
3 months ago by i.sudbery 19k
1
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0
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325
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Comment: Comment: Using Expression of a Gene as a Linear Regression Variable
3 months ago by i.sudbery 19k
1
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1
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869
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Answer: Answer: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
updated 3 months ago by 43k • written 3 months ago by 19k
0
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0
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869
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Comment: Comment: Deciding if a study used Bulk or single-cell RNA sequencing using the GEO data
3 months ago by i.sudbery 19k
1
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1
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527
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Comment: Comment: Differential expression analysis in a short gene list
3 months ago by i.sudbery 19k
2
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1
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533
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Comment: Comment: Question about identification of DEGs in paired sample using edgeR
3 months ago by i.sudbery 19k
4
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1
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527
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Answer: Answer: Differential expression analysis in a short gene list
3 months ago by i.sudbery 19k
2
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1
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533
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Answer: Answer: Question about identification of DEGs in paired sample using edgeR
3 months ago by i.sudbery 19k
2
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0
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2.0k
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Comment: Comment: First experiences matter
3 months ago by i.sudbery 19k
1
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2
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795
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Comment: Comment: How to get enhancer regions
3 months ago by i.sudbery 19k
2
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0
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698
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Comment: Comment: Log2 transformation is well used, but is there a good paper that can be used as
3 months ago by i.sudbery 19k
0
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0
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1.1k
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Comment: Comment: How to define the density (or something else) of B in the sequence, considering
3 months ago by i.sudbery 19k
3
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1
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510
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Comment: Comment: Doublechecking enrichment of promoters of DE genes
3 months ago by i.sudbery 19k
0
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0
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839
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Comment: Comment: installing DESeq2 on Windows
updated 3 months ago by 43k • written 4 months ago by 19k
1
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0
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585
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Answer: Answer: Do batches contain biological variations in omics data (RNAseq or scRNAseq)?
updated 4 months ago by 43k • written 4 months ago by 19k
3
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1
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839
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Answer: Answer: installing DESeq2 on Windows
4 months ago by i.sudbery 19k
1
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0
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1.7k
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Comment: Comment: What apps can read large FASTQ files on Windows?
4 months ago by i.sudbery 19k
1
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1
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1.7k
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Answer: Answer: What apps can read large FASTQ files on Windows?
4 months ago by i.sudbery 19k
1
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1
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563
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Answer: Answer: Best method for batch correction of three datasets
updated 4 months ago by 82k • written 4 months ago by 19k
0
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0
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869
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Comment: Comment: p-value combination methods
5 months ago by i.sudbery 19k
1
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1
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869
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Comment: Comment: p-value combination methods
5 months ago by i.sudbery 19k
0
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0
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350
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Answer: Answer: multiple condition and time course in RNA-seq
5 months ago by i.sudbery 19k
2
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1
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776
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Comment: Comment: Downstream analysis with DEseq2 normalization
5 months ago by i.sudbery 19k
2
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0
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621
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Answer: Answer: Does DESeq2 correct for library size when importing the counts with DESeqDataSet
5 months ago by i.sudbery 19k
0
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0
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896
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Comment: Comment: Command line or python RNA-seq read simulator
5 months ago by i.sudbery 19k
0
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0
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896
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Comment: Comment: Command line or python RNA-seq read simulator
5 months ago by i.sudbery 19k
0
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0
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896
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Comment: Comment: Command line or python RNA-seq read simulator
5 months ago by i.sudbery 19k
1
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1
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1.2k
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Comment: Comment: Is my data too noisy for DESeq? Should I model noise as unwanted variation?
5 months ago by i.sudbery 19k
0
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2
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896
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Comment: Comment: Command line or python RNA-seq read simulator
5 months ago by i.sudbery 19k
1,492 results • Page 2 of 30
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