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Comment: Comment: CDS vs cDNA vs transcript for mapping RNA-Seq reads
7 days ago by Antonio R. Franco ★ 5.1k
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716
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Answer: Answer: How to align a genome fasta file from NCBI to a reference genome?
5 months ago by Antonio R. Franco ★ 5.1k
1
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4
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6.5k
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How to order a gff3 file by coordinates
gff3 ordering
updated 7 months ago by ▴ 120 • written 6.2 years ago by ★ 5.1k
1
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0
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748
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Comment: Comment: GO enrichment analysis
13 months ago by Antonio R. Franco ★ 5.1k
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1
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748
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Answer: Answer: GO enrichment analysis
13 months ago by Antonio R. Franco ★ 5.1k
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0
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856
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Answer: Answer: Samtools unmapped reads
14 months ago by Antonio R. Franco ★ 5.1k
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1
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895
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Answer: Answer: Differentially gene expression analysis
15 months ago by Antonio R. Franco ★ 5.1k
1
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1
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1.5k
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Answer: Answer: Scientific Notation to Decimal
15 months ago by Antonio R. Franco ★ 5.1k
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0
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816
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Comment: Comment: How does Fasta protein split into columns?
16 months ago by Antonio R. Franco ★ 5.1k
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0
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1.5k
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Answer: Answer: Salmon update on Linux
16 months ago by Antonio R. Franco ★ 5.1k
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1
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489
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Comment: Comment: How to create features?
16 months ago by Antonio R. Franco ★ 5.1k
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0
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582
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Answer: Answer: Meta-analysis using 16S rRNA NGS data
17 months ago by Antonio R. Franco ★ 5.1k
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0
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1.7k
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Comment: Comment: Different results in finding human sequences from metagenomes (bowtie2 and Krake
17 months ago by Antonio R. Franco ★ 5.1k
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0
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1.7k
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Comment: Comment: UniProt ID, genes
17 months ago by Antonio R. Franco ★ 5.1k
4
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2
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1.7k
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Answer: Answer: UniProt ID, genes
17 months ago by Antonio R. Franco ★ 5.1k
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0
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656
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Comment: Comment: Primer Design
17 months ago by Antonio R. Franco ★ 5.1k
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1
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656
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Answer: Answer: Primer Design
17 months ago by Antonio R. Franco ★ 5.1k
2
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0
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1.2k
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Answer: Answer: is higher logFC always good?
18 months ago by Antonio R. Franco ★ 5.1k
1
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0
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740
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Answer: Answer: GO ontology- no biological processes found
18 months ago by Antonio R. Franco ★ 5.1k
0
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0
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836
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Comment: Comment: Best practices and programs tu run a WGS genetic analysis
18 months ago by Antonio R. Franco ★ 5.1k
0
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0
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836
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Comment: Comment: Best practices and programs tu run a WGS genetic analysis
19 months ago by Antonio R. Franco ★ 5.1k
6
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5
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836
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Best practices and programs tu run a WGS genetic analysis
Genetic WGS analysis
18 months ago by Antonio R. Franco ★ 5.1k
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0
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836
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Answer: Answer: Best practices and programs tu run a WGS genetic analysis
19 months ago by Antonio R. Franco ★ 5.1k
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1
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1.5k
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Comment: Comment: Fasta headers column spilt or selection
19 months ago by Antonio R. Franco ★ 5.1k
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0
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1.4k
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Comment: Comment: How to extracting rows that have the same values in all columns in Linux ?
19 months ago by Antonio R. Franco ★ 5.1k
0
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1
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1.4k
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Answer: Answer: How to extracting rows that have the same values in all columns in Linux ?
19 months ago by Antonio R. Franco ★ 5.1k
0
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0
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760
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Comment: Comment: How to produce count matrix with multiple run files?
21 months ago by Antonio R. Franco ★ 5.1k
0
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1
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760
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Answer: Answer: How to produce count matrix with multiple run files?
21 months ago by Antonio R. Franco ★ 5.1k
0
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1
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680
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Answer: Answer: Stringtie skips some reference genes
21 months ago by Antonio R. Franco ★ 5.1k
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0
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1.2k
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Answer: Answer: Extract certain fasta sequnce from multi fasta file
21 months ago by Antonio R. Franco ★ 5.1k
0
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1
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1.4k
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Comment: Comment: How to do GO enrichment analysis for Klebsiella pneumonia?
21 months ago by Antonio R. Franco ★ 5.1k
1
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0
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870
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Answer: Answer: Fastq: how can I check if they are from DNA or RNAseq data?
22 months ago by Antonio R. Franco ★ 5.1k
0
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0
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14k
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Comment: Comment: Which strand specific option need to be used with HISAT2?
16 months ago by Antonio R. Franco ★ 5.1k
1
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0
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1.5k
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Comment: Comment: setting up Kallisto software
22 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.3k
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Comment: Comment: Getting the best of RNA-Seq
22 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.3k
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Comment: Comment: Getting the best of RNA-Seq
22 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.3k
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Comment: Comment: Getting the best of RNA-Seq
22 months ago by Antonio R. Franco ★ 5.1k
2
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6
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1.3k
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Forum: Getting the best of RNA-Seq
RNA-Seq isoform gene expression
22 months ago by Antonio R. Franco ★ 5.1k
0
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0
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857
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Answer: Answer: Software/packages for analyzing differential isoforms from RNA-seq data?
22 months ago by Antonio R. Franco ★ 5.1k
0
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1
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1.7k
views
Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
22 months ago by Antonio R. Franco ★ 5.1k
0
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2
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1.7k
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Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
22 months ago by Antonio R. Franco ★ 5.1k
3
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0
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1.7k
views
Comment: Comment: Issues with newer Kallisto versions (aka 0.46.1)
22 months ago by Antonio R. Franco ★ 5.1k
11
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10
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1.7k
views
Issues with newer Kallisto versions (aka 0.46.1)
Kallisto
updated 22 months ago by ★ 6.0k • written 22 months ago by ★ 5.1k
0
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0
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1.8k
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Comment: Comment: DESeq2 installation error
23 months ago by Antonio R. Franco ★ 5.1k
0
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1
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1.2k
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
23 months ago by Antonio R. Franco ★ 5.1k
0
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0
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1.2k
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
23 months ago by Antonio R. Franco ★ 5.1k
0
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1
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1.2k
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
23 months ago by Antonio R. Franco ★ 5.1k
0
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2
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1.2k
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Comment: Comment: Assesing contaminants sequences from long genomic contigs
23 months ago by Antonio R. Franco ★ 5.1k
5
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9
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1.2k
views
Assesing contaminants sequences from long genomic contigs
genomic PacBio sequences contaminants
updated 23 months ago by 142k • written 23 months ago by ★ 5.1k
1
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0
replies
698
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Comment: Comment: samtools convert SAM to BAM error code
2.0 years ago by Antonio R. Franco ★ 5.1k
682 results • Page 1 of 14
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