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Comment: Comment: What are the values shown on DESEQ2 heatmap legend?
20 months ago by karl.stamm 4.1k
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2.1k
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Comment: Comment: AF = 0.5 in chrX, VCF of a male
20 months ago by karl.stamm 4.1k
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631
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Comment: Comment: Why am I getting same linear regression lines for 'x' on 'y' and 'y' on 'x'?
23 months ago by karl.stamm 4.1k
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752
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Comment: Comment: PCA does not show distinction in groups
2.1 years ago by karl.stamm 4.1k
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1.9k
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Comment: Comment: Non biology & computer professional interested in bioinformatics
2.5 years ago by karl.stamm 4.1k
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1
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879
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Comment: Comment: probability of two samples sharing a SNP by error
2.6 years ago by karl.stamm 4.1k
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1
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2.0k
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Comment: Comment: SNP Pruning Through PCA
2.7 years ago by karl.stamm 4.1k
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722
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Comment: Comment: Advise for a computational neophyte
2.7 years ago by karl.stamm 4.1k
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866
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Comment: C: On understanding the axis of a PCA plot
3.2 years ago by karl.stamm 4.1k
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1
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1.3k
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Comment: C: [RNA-seq] Extremely Unconsistent Raw Count from Different Tools; a dark mistery
3.2 years ago by karl.stamm 4.1k
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2.5k
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Comment: C: A question on the interpretation of a PCA plot
3.2 years ago by karl.stamm 4.1k
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1
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935
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Comment: C: Very high ratio of cases to controls - how to increase statistical power?
3.2 years ago by karl.stamm 4.1k
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1
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935
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Comment: C: Very high ratio of cases to controls - how to increase statistical power?
3.2 years ago by karl.stamm 4.1k
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1
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808
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Comment: C: Problems with the same gene names in R, any help?
3.2 years ago by karl.stamm 4.1k
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4.8k
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Comment: C: PEPATAC error: ConnectionResetError: [Errno 104] Connection reset by peer
3.3 years ago by karl.stamm 4.1k
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6.8k
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Comment: C: How to handle duplicate row names in R
3.3 years ago by karl.stamm 4.1k
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1.7k
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Comment: C: During RNA-seq analysis a lot of pseudogenes come up as DE
3.3 years ago by karl.stamm 4.1k
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3.8k
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Comment: C: What are the 5 biggest challenges/ opportunities in Bioinformatics going into 20
3.3 years ago by karl.stamm 4.1k
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2.4k
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Comment: C: Is there a tool to predict if a missense variant causes a loss of function on th
3.3 years ago by karl.stamm 4.1k
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1
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2.5k
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Comment: C: A question on the interpretation of a PCA plot
3.4 years ago by karl.stamm 4.1k
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0
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986
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Comment: C: Optimal Number of SNPs in NA12878 WES Data
3.4 years ago by karl.stamm 4.1k
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1
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986
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Comment: C: Optimal Number of SNPs in NA12878 WES Data
3.4 years ago by karl.stamm 4.1k
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1
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599
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Comment: C: Mapping transcriptomes against each other to find genetic differences
3.4 years ago by karl.stamm 4.1k
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1.4k
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Comment: C: Convert R script to python(implementation of the UPGMA OR neighbor joining algor
3.4 years ago by karl.stamm 4.1k
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1.2k
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Comment: C: Transforming big file
3.4 years ago by karl.stamm 4.1k
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1
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1.2k
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Comment: C: Transforming big file
3.4 years ago by karl.stamm 4.1k
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0
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875
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Comment: C: Wes analysis - Quality control on sequenced data
3.4 years ago by karl.stamm 4.1k
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1
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711
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Comment: C: What is the smallest number of cases you can have in a GWAS before interpretatio
3.4 years ago by karl.stamm 4.1k
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1
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4.4k
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Comment: C: how do I find the genes which are common to and those which differ between multi
3.5 years ago by karl.stamm 4.1k
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0
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3.4k
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Comment: C: Why is gnomAD AF vs gnomAD exome AF so different?
3.5 years ago by karl.stamm 4.1k
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0
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1.0k
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Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by karl.stamm 4.1k
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1
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1.9k
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Comment: C: Interpreting theta value
3.5 years ago by karl.stamm 4.1k
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1
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1.0k
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Comment: C: How to do a multi-snp/haplotype based GWAS instead of a single snp GWAS in R?
3.5 years ago by karl.stamm 4.1k
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0
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1.2k
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Comment: C: Publicly Available RNA-Seq Datasets from Human Heart
3.5 years ago by karl.stamm 4.1k
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1.0k
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Comment: C: Should we Ignore heterozygous SNPs while constructing SNP based phylogeny
3.5 years ago by karl.stamm 4.1k
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1
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987
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Comment: C: Genes inhibiting each other's expression
3.6 years ago by karl.stamm 4.1k
2
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2.9k
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Comment: C: Why are we assuming most genes are not differentially expressed?
3.6 years ago by karl.stamm 4.1k
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1.1k
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Comment: C: Does 1000 genomes have a flat file with allele frequencies for each site anywher
3.6 years ago by karl.stamm 4.1k
1
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0
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654
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Comment: C: Resources for learning how to submit jobs in unix-based cluster
3.6 years ago by karl.stamm 4.1k
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1
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1.5k
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Comment: C: rnammer error :the command line on the script does not work
3.7 years ago by karl.stamm 4.1k
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1
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1.5k
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Comment: C: rnammer error :the command line on the script does not work
3.7 years ago by karl.stamm 4.1k
1
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1
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1.2k
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Comment: C: blastn much slower on longer subject sequences?
3.7 years ago by karl.stamm 4.1k
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1.7k
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Comment: C: For loop error for merging HTSeq counts
3.7 years ago by karl.stamm 4.1k
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1
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1.2k
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Comment: C: blastn much slower on longer subject sequences?
3.7 years ago by karl.stamm 4.1k
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0
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776
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Comment: C: Conserved regions around mutations
3.7 years ago by karl.stamm 4.1k
1
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1
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776
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Comment: C: Conserved regions around mutations
3.7 years ago by karl.stamm 4.1k
2
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1
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3.9k
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Comment: C: How do I process a FASTQ file in RStudio?
3.7 years ago by karl.stamm 4.1k
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1
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2.5k
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Comment: C: How do I setup the pre-built indexed reference for Bowtie2
3.7 years ago by karl.stamm 4.1k
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1
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18k
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Comment: C: Markduplicates: Value Was Put Into Pairinfomap More Than Once
3.8 years ago by karl.stamm 4.1k
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0
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2.4k
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Comment: C: Does anyone know any ANNOVAR alternatives for Whole Genome Sequencing with flexi
3.8 years ago by karl.stamm 4.1k
377 results • Page 1 of 8
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