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answers
2
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1
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1.3k
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Answer:
Answer: Understanding 1/1 output in VCF
17 months ago by
karl.stamm
4.1k
1
vote
0
replies
736
views
Answer:
Answer: What are the data values in qRT-PCR for statistical testing? dCT? or 2^-dCT?
22 months ago by
karl.stamm
4.1k
0
votes
1
reply
1.9k
views
Answer:
Answer: Non biology & computer professional interested in bioinformatics
2.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
784
views
Answer:
Answer: RSQLite slowness
2.6 years ago by
karl.stamm
4.1k
1
vote
0
replies
5.3k
views
Answer:
Answer: Why does my t-test fail?
updated 2.7 years ago by
Ram
43k • written 2.7 years ago by
karl.stamm
4.1k
4
votes
1
reply
958
views
Answer:
Answer: RNA-seq for samples with RIN<3
2.8 years ago by
karl.stamm
4.1k
3
votes
0
replies
875
views
Answer:
Answer: How to select columns from a dataframe of which the name ends with a specific wo
2.8 years ago by
karl.stamm
4.1k
0
votes
0
replies
899
views
Answer:
A: How to map reads onto human hg38 gene body regions instead of whole genome?
3.3 years ago by
karl.stamm
4.1k
0
votes
1
reply
1.0k
views
Answer:
A: Loading Matrices of 10X Genomics failed
3.3 years ago by
karl.stamm
4.1k
1
vote
1
reply
2.2k
views
Answer:
A: Read depth maxing out at about 8000
3.4 years ago by
karl.stamm
4.1k
1
vote
0
replies
1.3k
views
Answer:
A: Is there a way to map long fasta reads to short reference sequences?
3.4 years ago by
karl.stamm
4.1k
1
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1
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1.3k
views
Answer:
A: Multiple plots using for loops in R
3.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.1k
views
Answer:
A: How to a make schematic picture for RNA-seq steps
3.6 years ago by
karl.stamm
4.1k
1
vote
0
replies
1.2k
views
Answer:
A: Help understanding bcftools call genotyping decision
3.6 years ago by
karl.stamm
4.1k
2
votes
0
replies
2.9k
views
Answer:
A: Why are we assuming most genes are not differentially expressed?
3.6 years ago by
karl.stamm
4.1k
3
votes
1
reply
1.7k
views
Answer:
A: For loop error for merging HTSeq counts
3.7 years ago by
karl.stamm
4.1k
1
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1
reply
1.1k
views
Answer:
A: Roary parameters optimization (Noob question: CPUs X Threads)
3.8 years ago by
karl.stamm
4.1k
0
votes
0
replies
826
views
Answer:
A: list of rsids that are not consistent across builds
3.8 years ago by
karl.stamm
4.1k
0
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1
reply
2.5k
views
Answer:
A: Extracting Genes that contribute to 1st PC
3.8 years ago by
karl.stamm
4.1k
2
votes
1
reply
5.4k
views
Answer:
A: DESeq2 Error: package or namespace load failed for 'DESeq2'
4.0 years ago by
karl.stamm
4.1k
2
votes
0
replies
2.8k
views
Answer:
A: How to extract sequences from multi fasta file, which contains specific primers?
4.1 years ago by
karl.stamm
4.1k
1
vote
0
replies
2.0k
views
Answer:
A: Editing source scripts in a container
4.1 years ago by
karl.stamm
4.1k
3
votes
1
reply
4.0k
views
Answer:
A: multithreading in psiblast
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
karl.stamm
4.1k
1
vote
1
reply
7.9k
views
Answer:
A: Using Biopython for BLAST Queries is very slow
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
karl.stamm
4.1k
2
votes
1
reply
7.2k
views
Answer:
A: IGV can't view SAM file
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
karl.stamm
4.1k
2
votes
0
replies
4.5k
views
Answer:
A: Is LOESS normalization done to each sample independently?
updated 4.3 years ago by
Ram
43k • written 9.9 years ago by
karl.stamm
4.1k
0
votes
0
replies
4.0k
views
Answer:
A: Clustering Method For Coexpressed Genes
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
karl.stamm
4.1k
1
vote
1
reply
9.7k
views
Answer:
A: Shannon entropy of a DNA motif?
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
karl.stamm
4.1k
1
vote
1
reply
4.2k
views
Answer:
A: Question:IMPUTE2: the p-value of snps in the output gen file is different from t
updated 4.3 years ago by
Ram
43k • written 10.0 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.2k
views
Answer:
A: Do the BLAST scores have any relation between them?
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
karl.stamm
4.1k
1
vote
1
reply
7.1k
views
Answer:
A: Should I Run Clustering on PCA or t-SNE Components?
4.4 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.6k
views
Answer:
A: Local Blast Database
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
karl.stamm
4.1k
8
votes
0
replies
43k
views
Answer:
A: Aggregate multiple rows based on common values in given columns in R
updated 4.4 years ago by
Ram
43k • written 8.4 years ago by
karl.stamm
4.1k
1
vote
1
reply
8.7k
views
Answer:
A: Pearson Correlation test between two Chip-Seq data sets
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
karl.stamm
4.1k
1
vote
0
replies
2.9k
views
Answer:
A: Statistical Tests for Genetic Associations (Permutation)
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.1k
views
Answer:
A: How to estimate of coefficients of logistic model
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
karl.stamm
4.1k
3
votes
0
replies
3.1k
views
Answer:
A: error in running R
updated 4.4 years ago by
Ram
43k • written 8.5 years ago by
karl.stamm
4.1k
3
votes
0
replies
1.5k
views
Answer:
A: How to read and interfere the start and the end by bp of these regions (chromoso
updated 4.5 years ago by
Ram
43k • written 8.7 years ago by
karl.stamm
4.1k
0
votes
0
replies
2.4k
views
Answer:
Answer: RNAseq project ideas for young intern with MISO?
updated 18 months ago by
Ram
43k • written 8.7 years ago by
karl.stamm
4.1k
1
vote
1
reply
2.5k
views
Answer:
A: How to correctly filer out gene expression matrix by measuring Pearson correlati
4.9 years ago by
karl.stamm
4.1k
1
vote
1
reply
876
views
Answer:
A: Best statistical test for genotype-specific gene expression analysis
5.0 years ago by
karl.stamm
4.1k
1
vote
0
replies
1.9k
views
Answer:
A: bash, how can I distinguish synonymous from non-synonymous variants in VCF files
5.2 years ago by
karl.stamm
4.1k
1
vote
1
reply
1.7k
views
Answer:
A: Diploid calls on chrY?
5.2 years ago by
karl.stamm
4.1k
1
vote
1
reply
4.3k
views
Answer:
A: Missing data in covariate file in PLINK
5.3 years ago by
karl.stamm
4.1k
1
vote
1
reply
1.5k
views
Answer:
A: Neural networks feature importance
5.5 years ago by
karl.stamm
4.1k
1
vote
1
reply
2.5k
views
Answer:
A: Automation of R package loading
updated 5.6 years ago by
Ram
43k • written 8.2 years ago by
karl.stamm
4.1k
1
vote
0
replies
2.4k
views
Answer:
A: How to choose calibrator (housekeeping) genes for RT-qPCR normalisation
updated 5.6 years ago by
Ram
43k • written 8.0 years ago by
karl.stamm
4.1k
3
votes
1
reply
2.5k
views
Answer:
A: BWA mem of a heavily masked reference index takes more time than the normal refe
5.8 years ago by
karl.stamm
4.1k
0
votes
0
replies
1.8k
views
Answer:
A: BRIG: How to generate high resolution image
6.5 years ago by
karl.stamm
4.1k
2
votes
1
reply
3.4k
views
Answer:
A: realign bam files using bwa
updated 6.5 years ago by
Ram
43k • written 8.8 years ago by
karl.stamm
4.1k
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