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Erik Garrison
Erik Garrison
Reputation:
2,390
Joined:
15.8 years ago
Last seen:
1.4 years ago
Location:
Napoli, IT / UCSC

Postdoc at UCSC's Genome Institute, living in Napoli, Italia.

Latest posts by user
1 vote
1 reply
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Answer: Answer: HTSlib threads when ingesting large bgzipped FASTA
written by Erik Garrison Erik Garrison
0 votes
1 reply
0 views
Comment: C: supporting vg users on biostars
written by Erik Garrison Erik Garrison
6 votes
4 replies
2.8K views
News: supporting vg users on biostars
variation-graph genome vg vgteam
updated by Ram Ram • written by Erik Garrison Erik Garrison
3 votes
1 reply
0 views
Answer: A: Indel Left/Right Alignment
updated by Ram Ram • written by Erik Garrison Erik Garrison
3 votes
0 replies
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Answer: Answer: Easy to use local assembly programs ?
updated by Ram Ram • written by Erik Garrison Erik Garrison
0 votes
0 replies
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Comment: C: Does The Vcffilter Tool Work On String Type Info Tags?
written by Erik Garrison Erik Garrison
1 vote
0 replies
342 views
Answer: A: Get Insertion / Deletion Count From Vcf
written by Erik Garrison Erik Garrison
0 votes
0 replies
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Comment: C: Gatk - Haplotypecaller Is So Slow, What Is Faster And As Good?
written by Erik Garrison Erik Garrison
21 votes
2 replies
664 views
Answer: A: Filters/Quality For Vcf Generated By Freebayes
written by Erik Garrison Erik Garrison
0 votes
0 replies
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Comment: C: What License Do You Use When You Release Code And Data?
written by Erik Garrison Erik Garrison
2 votes
0 replies
289 views
Answer: A: How To Get A List Of All Correlated Snps (In Ld) With Another List Of Snps?
written by Erik Garrison Erik Garrison
2 votes
0 replies
437 views
Answer: A: Snp Calling Of Tcga Data Using Samtools
written by Erik Garrison Erik Garrison
2 votes
0 replies
219 views
Comment: C: Best Software For Detection Of Somatic Mutations From Matched Tumor:Normal Ngs D
written by Erik Garrison Erik Garrison
0 votes
0 replies
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Comment: C: Error: Eof Marker Is Absent When Processing A Bam File
written by Erik Garrison Erik Garrison
0 votes
1 reply
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Answer: A: Bam To Bed With Read Nucleotide Sequences
written by Erik Garrison Erik Garrison
3 votes
1 reply
260 views
Answer: A: Variant Calling From Single Cell Sequencing Data?
written by Erik Garrison Erik Garrison
0 votes
0 replies
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Comment: C: What Methods Do You Use For In/Del/Snp Calling?
written by Erik Garrison Erik Garrison
0 votes
2 replies
0 views
Comment: C: Sample Sam File
written by Erik Garrison Erik Garrison
0 votes
1 reply
0 views
Comment: C: Gatk - Haplotypecaller Is So Slow, What Is Faster And As Good?
written by Erik Garrison Erik Garrison
0 votes
0 replies
0 views
Comment: C: Local Realignment And Local De Novo Assembly Software
written by Erik Garrison Erik Garrison
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