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7
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8
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1.3k
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Forum: Guidelines / Limits for Shared Bioinformatics Support
Core Shared-Resources Collaboration
updated 11 months ago by 43k • written 4.5 years ago by 8.2k
3
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0
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2.9k
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Answer: A: Interesting things to do with 23andme data
4.5 years ago by Charles Warden 8.2k
2
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0
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699
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Answer: A: Which is the best dna kit in the us market
4.5 years ago by Charles Warden 8.2k
0
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0
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1.7k
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Comment: C: How to phase my own 23andMe data ?
4.5 years ago by Charles Warden 8.2k
4
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2
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1.7k
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Answer: A: How to phase my own 23andMe data ?
4.5 years ago by Charles Warden 8.2k
1
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0
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1.9k
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Answer: A: RNA-seq Differential expression analysis show no differentially expressed genes
4.5 years ago by Charles Warden 8.2k
0
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0
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17k
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Answer: A: Is there an R package that pulls up gene functional annotations with gene symbol
4.5 years ago by Charles Warden 8.2k
1
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0
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860
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Controlled Access Database for Human Samples Collected after 1/25/2015 (without informed consent for genomic data deposit)?
GDS informed consent data deposit dbGaP EGA
4.5 years ago by Charles Warden 8.2k
0
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0
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1.0k
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Answer: A: Machine learning using microarray data
4.5 years ago by Charles Warden 8.2k
2
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1
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3.2k
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Comment: C: Drug resistant vs. Drug sensitive data retreival from TCGA
4.5 years ago by Charles Warden 8.2k
2
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0
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654
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Answer: A: Possible Ideas for Citizen Science Project
4.5 years ago by Charles Warden 8.2k
0
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0
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4.6k
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Comment: C: How to automate bcl2fastq such that it is launched every time the run finishes o
4.5 years ago by Charles Warden 8.2k
0
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1
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4.6k
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Comment: A: How to automate bcl2fastq such that it is launched every time the run finishes o
4.5 years ago by Charles Warden 8.2k
2
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1
reply
1.9k
views
Answer: A: Different number of peaks between biological replicates?
4.5 years ago by Charles Warden 8.2k
0
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0
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4.8k
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Comment: C: edgeR gives no DE genes <0.05 FDR
4.6 years ago by Charles Warden 8.2k
0
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1
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7.8k
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Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
4.6 years ago by Charles Warden 8.2k
0
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1
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7.8k
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Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
4.6 years ago by Charles Warden 8.2k
2
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0
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4.4k
views
Answer: Answer: Infinium/Illumina 450K methylation array data analysis: How to compare the vario
updated 2.1 years ago by 43k • written 9.3 years ago by 8.2k
1
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0
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130k
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Answer: Answer: Is There A Free Alternative To Ingenuity Pathway Analysis?
updated 2.1 years ago by 43k • written 9.3 years ago by 8.2k
2
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0
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16k
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Comment: Comment: What tools you use or know for PacBio Long Read error correction?
updated 3.1 years ago by 43k • written 9.3 years ago by 8.2k
4
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1
reply
16k
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Answer: Answer: What tools you use or know for PacBio Long Read error correction?
updated 3.1 years ago by 43k • written 9.3 years ago by 8.2k
4
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1
reply
4.8k
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Answer: A: Statistical test for DMR annotation?
updated 4.6 years ago by 43k • written 9.4 years ago by 8.2k
1
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0
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3.1k
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Answer: A: Estimate alternative splicing rate using RNA-Seq
updated 4.6 years ago by 43k • written 9.6 years ago by 8.2k
0
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0
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1.5k
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Comment: C: Does Abyss work on single-end Illumina reads only?
4.6 years ago by Charles Warden 8.2k
2
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1
reply
4.8k
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Answer: A: edgeR gives no DE genes <0.05 FDR
4.6 years ago by Charles Warden 8.2k
0
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0
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1.6k
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Comment: C: 450k methylation array - 2 raw intensity values for same probe
4.6 years ago by Charles Warden 8.2k
0
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1
reply
1.6k
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Comment: C: 450k methylation array - 2 raw intensity values for same probe
4.6 years ago by Charles Warden 8.2k
0
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1
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1.6k
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Answer: A: 450k methylation array - 2 raw intensity values for same probe
4.6 years ago by Charles Warden 8.2k
0
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1
reply
1.5k
views
Answer: A: Does Abyss work on single-end Illumina reads only?
4.6 years ago by Charles Warden 8.2k
0
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0
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1.5k
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Comment: C: Does Abyss work on single-end Illumina reads only?
4.6 years ago by Charles Warden 8.2k
0
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0
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3.7k
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Comment: C: Varscan somatic error
updated 4.6 years ago by 43k • written 9.8 years ago by 8.2k
1
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1
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5.8k
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Answer: A: Small CNV calling (exome deletions and insertions)
updated 4.6 years ago by 43k • written 9.8 years ago by 8.2k
0
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1
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5.2k
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Comment: Comment: How can I use SNPeff with this genome?
updated 2.5 years ago by 43k • written 9.9 years ago by 8.2k
0
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1
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5.2k
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Answer: A: How can I use SNPeff with this genome?
updated 4.6 years ago by 43k • written 9.9 years ago by 8.2k
4
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2
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5.0k
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Answer: A: alternative splicing analysis
updated 4.6 years ago by 43k • written 9.9 years ago by 8.2k
1
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0
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4.4k
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Answer: A: Differential expression level of different exons from RNA-seq indicates what?
updated 4.6 years ago by 43k • written 9.9 years ago by 8.2k
0
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0
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4.1k
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Comment: C: How to define a full-length transcript for transcriptome assembly?
updated 4.6 years ago by 43k • written 9.9 years ago by 8.2k
1
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1
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6.4k
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Answer: A: RNA-seq analysis for Ion Proton Transcriptome data - tophat2 error
updated 4.6 years ago by 43k • written 9.9 years ago by 8.2k
0
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1
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4.2k
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Comment: C: Best Cnv Software?
updated 4.6 years ago by 43k • written 10.0 years ago by 8.2k
0
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1
reply
5.3k
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Comment: C: how to combine methylation information from different platform?
updated 4.6 years ago by 43k • written 10.0 years ago by 8.2k
1
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0
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13k
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Answer: A: What is the best programming language for NGS data analysis pipeline development
updated 4.6 years ago by 43k • written 10.0 years ago by 8.2k
3
votes
1
reply
5.0k
views
Answer: A: TCGAs Methylation Data Annotation
updated 4.6 years ago by 43k • written 10.1 years ago by 8.2k
3
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1
reply
4.2k
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Answer: A: Methods or packages for identifying differential splicing
updated 4.6 years ago by 43k • written 10.1 years ago by 8.2k
0
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1
reply
7.0k
views
Comment: C: Bwa And Bwa Mem Produce Different Alignments
updated 4.6 years ago by 43k • written 10.2 years ago by 8.2k
0
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1
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7.0k
views
Answer: A: Bwa And Bwa Mem Produce Different Alignments
updated 4.6 years ago by 43k • written 10.2 years ago by 8.2k
0
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0
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2.9k
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Comment: C: Solid And Hiseq
4.6 years ago by Charles Warden 8.2k
1
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0
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4.5k
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Comment: C: SLURM on Mac OS
4.6 years ago by Charles Warden 8.2k
0
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0
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1.0k
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Answer: A: How to normalise RNA-sequencing data that only consists of coverage for around 2
4.6 years ago by Charles Warden 8.2k
0
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0
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1.4k
views
Answer: A: Can the gtf file needed to run rMATS be a transcript assembled by cufflinks and
4.7 years ago by Charles Warden 8.2k
0
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0
replies
7.8k
views
Comment: C: Calling Single-Barcode Samples from Mixed Runs as Dual-Barcode Samples | Possibl
4.7 years ago by Charles Warden 8.2k
1,057 results • Page 3 of 22
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