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Bertalan_Takacs
Bertalan_Takacs
Reputation:
140
Joined:
5.9 years ago
Last seen:
1.3 years ago
Location:
Hungary/Szeged/BRC
Latest posts by user
4 votes
0 replies
0 views
Answer: Answer: Picard gives empty value for HS_LIBRARY_SIZE when running CollectHsMetrics
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
0 views
Comment: Comment: Picard gives empty value for HS_LIBRARY_SIZE when running CollectHsMetrics
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
3 replies
1.2K views
Picard gives empty value for HS_LIBRARY_SIZE when running CollectHsMetrics
sequencing library picard
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
0 views
Comment: Comment: What statistical method would you use to compare individual microbiome samples?
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
2 replies
1.3K views
What statistical method would you use to compare individual microbiome samples?
comparison statistics microbiome
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
967 views
Are there "gold standard" datasets for identification of antibiotic resistance genes from metagenomic samples?
amr antibiotic resistance classification metagenomics
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
3 replies
1.3K views
Check if a BAM file is corrupt in Java
bam java
updated by Pierre Lindenbaum Pierre Lindenbaum • written by Bertalan_Takacs • Bertalan_Takacs
0 votes
1 reply
1.2K views
How to cluster microbial samples after principal coordinate analysis based on beta-diversity
clustering bray-curtis microbiome pcoa
updated by Mensur Dlakic Mensur Dlakic • written by Bertalan_Takacs • Bertalan_Takacs
0 votes
1 reply
0 views
Comment: Comment: Is it possible to get a list of representative genomes from a past RefSeq releas
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
1 reply
0 views
Comment: Comment: Is it possible to get a list of representative genomes from a past RefSeq releas
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
5 replies
1.5K views
Is it possible to get a list of representative genomes from a past RefSeq release?
representative ncbi asembly refseq
updated by GenoMax GenoMax • written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
0 views
Comment: Comment: esearch get taxonomy ID from a large list of accession IDs
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
0 views
Comment: Comment: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
773 views
I keep running into errors with the metagenomic classifer GOTTCHA. Can anybody offer some suggestions?
gottcha classification metagenomics
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
2 replies
2.2K views
Subsetting DGEList object for for a list of genes of interest
dgelist transcriptomics subset edger
updated by GenoMax GenoMax • written by Bertalan_Takacs • Bertalan_Takacs
1 vote
0 replies
0 views
Comment: Comment: What does the semicolon notation mean in proteomics analysis
written by Bertalan_Takacs • Bertalan_Takacs
1 vote
2 replies
1.2K views
What does the semicolon notation mean in proteomics analysis
differential expression semicolon proteomics analysis
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
4 replies
2.3K views
Precision-recall curve to compare metagenome classifiers to a gold standard - Is this even a viable method?
classification recall precision metagenome
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
813 views
Microbiome beta-diversity: Bray-Curtis dissimilarity seems to be biased toward more diverse populations
bray-curtis beta-diversity microbiome classification dissimilarity
written by Bertalan_Takacs • Bertalan_Takacs
0 votes
0 replies
595 views
Immediate segmentation error when using STAR on SMART-Seq data
segmentation smart-seq dumped scrna-seq star
written by Bertalan_Takacs • Bertalan_Takacs
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