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vaushev
vaushev
Reputation:
20
Joined:
13.4 years ago
Last seen:
5.1 years ago
Location:
United States

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Latest posts by user
0 votes
1 reply
2.0K views
getting a set of coverage/depth metrics for multiple regions
bedtools samtools
updated by Alex Reynolds Alex Reynolds • written by vaushev • vaushev
0 votes
1 reply
0 views
Comment: Comment: `samtools depth` reports all positions though I don't indicate `-a` or `-aa`
written by vaushev • vaushev
0 votes
3 replies
1.5K views
`samtools depth` reports all positions though I don't indicate `-a` or `-aa`
samtools
updated by Lila M Lila M • written by vaushev • vaushev
0 votes
0 replies
0 views
Comment: C: MPI/multi-threading in salmon quasi-mapping
written by vaushev • vaushev
0 votes
1 reply
0 views
Comment: C: MPI/multi-threading in salmon quasi-mapping
written by vaushev • vaushev
0 votes
1 reply
0 views
Comment: C: MPI/multi-threading in salmon quasi-mapping
written by vaushev • vaushev
0 votes
7 replies
3.4K views
MPI/multi-threading in salmon quasi-mapping
salmon rna-seq
updated by Devon Ryan Devon Ryan • written by vaushev • vaushev
0 votes
0 replies
0 views
Comment: C: warning when creating salmon index from GENCODE transcriptome
written by vaushev • vaushev
1 vote
3 replies
5.9K views
warning when creating salmon index from GENCODE transcriptome
salmon rna-seq
updated by Rob Rob • written by vaushev • vaushev
0 votes
0 replies
1.2K views
can't find why certain reads are unmapped by salmon
salmon rna-seq
written by vaushev • vaushev
0 votes
0 replies
443 views
Extract unmapped reads from salmon output
rna-seq rna-seq salmon
written by vaushev • vaushev
0 votes
1 reply
0 views
Comment: C: Get current gene identifiers for the results of microarray which has obsolete ge
written by vaushev • vaushev
0 votes
3 replies
2.5K views
Get current gene identifiers for the results of microarray which has obsolete gene IDs (using Illumina IDs, probe sequence etc)
illumina microarray bioconductor
updated by Jean-Karim Heriche Jean-Karim Heriche • written by vaushev • vaushev
0 votes
0 replies
0 views
Comment: C: Retrieving Features From Certain Position On Genome
written by vaushev • vaushev
1 vote
8 replies
3.8K views
Retrieving Features From Certain Position On Genome
genome ucsc
written by vaushev • vaushev
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