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Answer: Answer: ENSEMBL VEP custom annotation with GFF file
3.0 years ago by Emily 23k
3
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780
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Answer: Answer: VEP Disk Space
3.0 years ago by Emily 23k
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1.0k
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Answer: Answer: Find all genes in multiple regions
3.0 years ago by Emily 23k
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1.4k
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Answer: Answer: how to find homologous regions using genomic coordinates
3.0 years ago by Emily 23k
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2.0k
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Answer: Answer: VEP, dbNSFP, Offline Mode, Cache version
3.0 years ago by Emily 23k
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1.9k
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Answer: Answer: 20,000 Ensembl gene IDs with external gene name in hg19 but not in hg38
3.0 years ago by Emily 23k
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2.3k
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Answer: Answer: if you annotate a vcf with snpeff, how do you know if the annotation are referri
3.0 years ago by Emily 23k
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828
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Answer: Answer: IGH on Ensembl
3.0 years ago by Emily 23k
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1.6k
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Answer: Answer: Using VEP custom on ClinVar error - Couldn't find index.
3.1 years ago by Emily 23k
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765
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Answer: Answer: Ensembl fasta DNA data
3.1 years ago by Emily 23k
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1.2k
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Answer: Answer: How to get chromosomal position of list of RS number(GRCh38)?
3.1 years ago by Emily 23k
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1.9k
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Answer: Answer: Liftover vs Ensembl Crossmap
3.1 years ago by Emily 23k
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988
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Answer: Answer: How can I revert back the ensemble vep annotated positions to vcf positions?
3.1 years ago by Emily 23k
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4.0k
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Answer: A: Is the ENSEMBL FTP down?
3.2 years ago by Emily 23k
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0
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1.4k
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Answer: A: VEP missing refseq annotation in refseq cache?
3.2 years ago by Emily 23k
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0
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1.2k
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Answer: A: VEP custom annotation didn't add INFO field
3.2 years ago by Emily 23k
4
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1
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1.3k
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Answer: A: Getting the fasta format of a list of genes
3.2 years ago by Emily 23k
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552
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Answer: A: Ensembl REST to download transcript fastas
3.2 years ago by Emily 23k
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2.5k
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Answer: A: Biomart mmusculus_gene_ensembl mm39
3.2 years ago by Emily 23k
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0
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864
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Answer: A: How many INDELs and SNPs should I expect in vcf file and what the best parameter
3.2 years ago by Emily 23k
2
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1
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3.3k
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Answer: A: VEP is very slow. Fork doesnt seem to work
3.2 years ago by Emily 23k
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0
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811
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Answer: A: How do I add a GENSCAN track to the Ensembl Gene Summary
3.2 years ago by Emily 23k
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3.0k
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Answer: A: How to get REF and ALT alleles from a genotype data?
3.2 years ago by Emily 23k
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1.6k
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Answer: A: Where can I find data about gene expression in such deseases as bipolar (maniaca
3.2 years ago by Emily 23k
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0
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783
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Answer: A: Splice junction coordinates for Ensembl transcripts
3.2 years ago by Emily 23k
3
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1
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1.2k
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Answer: A: Trying to refine REST API query
3.2 years ago by Emily 23k
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1
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866
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Answer: A: Mapping DNA position to Protein Position in E. Coli
3.3 years ago by Emily 23k
3
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3
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4.5k
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Answer: A: VEP for cancer annotation using COSMIC
3.3 years ago by Emily 23k
22
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4
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23k
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Answer: A: ensembl gene id
updated 3.3 years ago by 43k • written 9.5 years ago by 23k
3
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1
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3.1k
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Answer: A: VEP allele frequency from gnomAD genomes
3.3 years ago by Emily 23k
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0
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1.1k
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Answer: A: Extract longest transcript from Ensembl gene table
3.3 years ago by Emily 23k
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1
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1.5k
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Answer: A: VEP installation problem
3.3 years ago by Emily 23k
4
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0
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1.6k
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Answer: A: Why VEP doesn't take strand into account?
3.3 years ago by Emily 23k
1
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0
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993
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Answer: A: Variant data from covid-19 patients
3.3 years ago by Emily 23k
2
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1
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789
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Answer: A: ensembl-vep annotation fail
3.3 years ago by Emily 23k
3
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0
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1.2k
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Answer: A: Why VEP annotates non-variants (homozygous reference)?
3.3 years ago by Emily 23k
0
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0
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614
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Answer: A: genomic region haplotype
3.3 years ago by Emily 23k
1
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1
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5.8k
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Answer: A: VEP cache issues
3.3 years ago by Emily 23k
0
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1
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1.4k
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Answer: A: dbNSFP VEP plugin and tabix query give different results
3.3 years ago by Emily 23k
2
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1
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589
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Answer: A: where can I find a table with the coordinates of all the exons in a specific tr
3.3 years ago by Emily 23k
1
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1
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1.2k
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Answer: A: Understanding Variant Effect Predictor results
3.3 years ago by Emily 23k
2
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0
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777
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Answer: A: Does VEP use alternative splicing in their calculations?
3.3 years ago by Emily 23k
2
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0
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777
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Answer: A: How to how "Gene Legend", "Regulation Legend" & "Human cDNAs" for a DNA sequence
3.4 years ago by Emily 23k
3
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0
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1.0k
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Answer: A: VEP coordinates do not result to same sequence as ref sequence in gsvar file
3.4 years ago by Emily 23k
1
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0
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601
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Answer: A: Is there any update about adding more reference genomes of plant species on Ense
3.4 years ago by Emily 23k
1
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0
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1.1k
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Answer: A: Problem with BiomaRt::useMart function Landscape Genomics
3.5 years ago by Emily 23k
1
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1
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1.4k
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Answer: A: I am confused which allele is the wildtype for certain SNPs
3.5 years ago by Emily 23k
1
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0
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1.3k
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Answer: A: VEP repeated region flag
3.5 years ago by Emily 23k
1
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0
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1.1k
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Answer: A: LINK SNPS TO GENES USING BIOMART, KEEPING YOUR INITIAL POSITIONS IN THE RESULTIN
3.5 years ago by Emily 23k
2
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0
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908
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Answer: A: retrieve matched genome/annotation pairs using Ensembl API
3.6 years ago by Emily 23k
643 results • Page 2 of 13
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