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2
votes
5
replies
1.3k
views
Difference in results from DESeq to EdgeR
EdgeR RNA-seq pseudobulk DGE DESeq2
updated 2.3 years ago by 8.7k • written 2.3 years ago by ▴ 110
1
vote
1
reply
1.8k
views
Unable to load scRNAseq data into R with Read10X
Seurat scRNA-seq RNA-seq Read10x single-cell
2.4 years ago by Rogerio Ribeiro ▴ 110
4
votes
6
replies
1.6k
views
Using outgroup in gene family dendograms
mega dendograms
3.1 years ago by Rogerio Ribeiro ▴ 110
3
votes
8
replies
2.0k
views
Quantification of stranded RNA-seq data
featureCounts RNA-seq stranded Hisat2
updated 3.1 years ago by 8.7k • written 3.1 years ago by ▴ 110
0
votes
3
replies
1.2k
views
Different files with SRA Explorer and SRA toolkit fasterq-dump
SRA_Explorer SRA-toolkit
updated 3.1 years ago by 142k • written 3.1 years ago by ▴ 110
3
votes
2
replies
3.1k
views
Trouble downloading files with fasterq-dump
sratoolkit
3.1 years ago by Rogerio Ribeiro ▴ 110
0
votes
0
replies
562
views
Advantages of different methods to transfer GO annotations
RNA-Seq GO Annotation
3.2 years ago by Rogerio Ribeiro ▴ 110
0
votes
4
replies
950
views
Bacterial refseq to remove contaminats
transcritpome RNA-seq
updated 3.2 years ago by • 0 • written 3.2 years ago by ▴ 110
0
votes
4
replies
881
views
Identify contaminants in my transcriptomic sequences
Assembly transcriptome de-novo
updated 3.2 years ago by 142k • written 3.2 years ago by ▴ 110
0
votes
5
replies
933
views
Optimized genome browser
RNA Genome
updated 3.2 years ago by 15k • written 3.3 years ago by ▴ 110
0
votes
2
replies
749
views
Question regarding stringtie algorithm and assembly strategy
Assembly RNA-Seq
updated 3.3 years ago by 19k • written 3.3 years ago by ▴ 110
1
vote
3
replies
1.1k
views
TruSeq sequencing output
RNA-Seq True-seq2
updated 3.3 years ago by 142k • written 3.3 years ago by ▴ 110
5
votes
10
replies
2.1k
views
Estimaing insert size from a pair-end library using bbmap
RNA-Seq bbmap
3.6 years ago by Rogerio Ribeiro ▴ 110
0
votes
3
replies
2.4k
views
Question regarding minimap2 presets
minimap2 alignment rna-seq
3.7 years ago by Rogerio Ribeiro ▴ 110
0
votes
0
replies
788
views
Hybrid transcriptome assembly
stringTie Nanopore Illumina Rna-seq
3.7 years ago by Rogerio Ribeiro ▴ 110
0
votes
1
reply
3.2k
views
Detail with minimap2 output
minimap2 RNA-seq Nanopore
3.7 years ago by Rogerio Ribeiro ▴ 110
0
votes
0
replies
1.8k
views
Exporting graphs from StrinGDB R package
StringGDB Protein-Protein-interaction
3.8 years ago by Rogerio Ribeiro ▴ 110
1
vote
0
replies
3.1k
views
Understanding minimap2 output (PAF format)
minimap2 PAF Parsing RNA-SEQ
4.0 years ago by Rogerio Ribeiro ▴ 110
0
votes
0
replies
818
views
Question regarding Busco full_table.tsv report
BUSCO RNA-Seq
4.0 years ago by Rogerio Ribeiro ▴ 110
0
votes
1
reply
2.2k
views
Importing Kallisto counts with tximport
transcriptomics kallisto rhdf5
4.1 years ago by Rogerio Ribeiro ▴ 110
0
votes
4
replies
858
views
Dealing with only 2 samples in RNA-SEQ
Transcriptomics Statistics
updated 4.1 years ago by ★ 5.1k • written 4.1 years ago by ▴ 110
8
votes
13
replies
1.9k
views
tBlastn taking an absurd amount of time
BLAST Transcriptomics omics software error
4.2 years ago by Rogerio Ribeiro ▴ 110
22 results • Page 1 of 1
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