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HaroonPakistan
HaroonPakistan
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4.1 years ago
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Pakistan
Latest posts by user
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Circular-Manhattan plot for GWAS
circular r rstudio manhattan plot
written by HaroonPakistan • HaroonPakistan
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Comment: Comment: gzip: transmute.Linux.gz: invalid compressed data--format violated
written by HaroonPakistan • HaroonPakistan
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Answer: Answer: Tophat2 "error running tophat_reports"
written by HaroonPakistan • HaroonPakistan
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Comment: Comment: tophat2 -o tophat_fusion -p 15 --fusion-search --keep-fasta-order --bowtie1 --no
written by HaroonPakistan • HaroonPakistan
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3 replies
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tophat2 -o tophat_fusion -p 15 --fusion-search --keep-fasta-order --bowtie1 --no-coverage-search hg19_bowtie1_index read_1.fastq read_2.fastq
circrnas tophat2 ciriexplorer2
updated by Pierre Lindenbaum Pierre Lindenbaum • written by HaroonPakistan • HaroonPakistan
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Answer: Answer: CIRIexplorer2 annotate
written by HaroonPakistan • HaroonPakistan
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2 replies
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CIRIexplorer2 annotate
circrnas ciriexplorer2
updated by Barry Digby Barry Digby • written by HaroonPakistan • HaroonPakistan
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Comment: Comment: Outputing gexpr() with gene_name (or gene symbol) instead of MSTRG.x gene_id
written by HaroonPakistan • HaroonPakistan
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1 reply
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Comment: Comment: Convert MSTRG gene IDs to real one?
written by HaroonPakistan • HaroonPakistan
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4 replies
4.2K views
Convert MSTRG gene IDs to real one?
gene mstrg stringtie
updated by swbarnes2 swbarnes2 • written by HaroonPakistan • HaroonPakistan
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2 replies
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Comment: Comment: Ballgown R Package
written by HaroonPakistan • HaroonPakistan
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Comment: Comment: Can we use ballgown if i don't have replicates
written by HaroonPakistan • HaroonPakistan
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5 replies
2.3K views
Ballgown R Package
r degs ballgown
updated by cpad0112 cpad0112 • written by HaroonPakistan • HaroonPakistan
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1 reply
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Comment: Comment: Error encountered while running stattest from ballgown package
written by HaroonPakistan • HaroonPakistan
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1 reply
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Comment: Comment: Cuffdiff for DEGs
updated by Ram Ram • written by HaroonPakistan • HaroonPakistan
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Comment: Comment: Cuffdiff for differential gene expression
written by HaroonPakistan • HaroonPakistan
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3 replies
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Cuffdiff for DEGs
degs cuffdiff
updated by Ram Ram • written by HaroonPakistan • HaroonPakistan
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1 reply
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Comment: Comment: Ballgown Package of R for the Differential Expressed Genes (DEGs)
written by HaroonPakistan • HaroonPakistan
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Comment: Comment: Ballgown Package of R for the Differential Expressed Genes (DEGs)
written by HaroonPakistan • HaroonPakistan
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Comment: Comment: R Programming for Differential Gene Expression Analysis
written by HaroonPakistan • HaroonPakistan
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