Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
2
replies
1.3k
views
Answer: Answer: Selecting MOUSE gene set libraries in Enrichr
8 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
678
views
Comment: Comment: Converting scMultiome data to loom using SEURAT
8 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
702
views
Answer: Answer: UMAP graph using DimPlot pre/post integration
8 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
905
views
Comment: Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
8 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.6k
views
Comment: Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.6k
views
Answer: Answer: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
2.6k
views
Answer: Answer: InferCNV results interpretation
8 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
1.0k
views
Answer: Answer: Can I using scVI to integrate data, then using R to conduct following analysis?
8 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
1.6k
views
Answer: Answer: Change transparency/alpha in seurat's vlnPlot()
9 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
569
views
Answer: Answer: HeatMap, R, Rownames
10 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
846
views
Answer: Answer: How to obtain cell-cell interaction list
10 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.0k
views
Comment: Comment: Housekeeping genes scRNA seq
10 months ago by fracarb8 ★ 1.6k
0
votes
2
replies
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by fracarb8 ★ 1.6k
5
votes
1
reply
2.5k
views
Answer: Answer: In Scanpy, how to RDS file and merge it with other Scanpy objects.
10 months ago by fracarb8 ★ 1.6k
7
votes
0
replies
5.7k
views
Answer: Answer: Convert Human to Mouse Symbols
10 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
797
views
Answer: Answer: Uploading 10x Data into R for Monocle 3
11 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
696
views
Answer: Answer: What kind of statistical test does Cellranger count use?
11 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
935
views
Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
11 months ago by fracarb8 ★ 1.6k
2
votes
0
replies
4.1k
views
Answer: Answer: Seurat 'DoHeatmap()' hierarchical clustering
11 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
985
views
Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
12 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
602
views
Comment: Comment: Remove string from Seurat Object
13 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
21k
views
Comment: Comment: How to get subset of a Seurat object based on metadata?
13 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
21k
views
Answer: Answer: How to get subset of a Seurat object based on metadata?
13 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
1.2k
views
Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
14 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.2k
views
Answer: Answer: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
14 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
2.2k
views
Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
15 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
2.2k
views
Answer: Answer: How to solve a possible memory issues with Seurat and IntegrateData step?
15 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.1k
views
Comment: Comment: How to use ClusterProfiler
15 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
413
views
Comment: Comment: Font name used in dittoSeq?
15 months ago by fracarb8 ★ 1.6k
2
votes
1
reply
641
views
Comment: Comment: R bug during normalize
15 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
675
views
Answer: Answer: exchange the monocle data with Seurat
15 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
765
views
Comment: Comment: HLA typing with archasHLA - DNA seq?
16 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
873
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
17 months ago by fracarb8 ★ 1.6k
2
votes
1
reply
873
views
Answer: Answer: bash script error to copy files from multiple directories to one directory
17 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
573
views
Answer: Answer: Extract Monocle2 "State" for Seurat
18 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.2k
views
Comment: Comment: How can I convert -log10 (p-value) to p-value?
18 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
833
views
Comment: Comment: How to deal with "///" in between gene symbols?
18 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.7k
views
Comment: Comment: Tuning seurat integration strength to prevent overcorrection
20 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.7k
views
Answer: Answer: Tuning seurat integration strength to prevent overcorrection
20 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
751
views
Answer: Answer: What is the best way to process a metadata file that SEURAT can read?
20 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
3.2k
views
Answer: Answer: SCTransform and differential gene expression
21 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
2.2k
views
Comment: Comment: Any script that can produce different mutations of protein sequences at specifie
21 months ago by fracarb8 ★ 1.6k
0
votes
2
replies
2.4k
views
Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
22 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
2.4k
views
Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
22 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
857
views
Comment: Comment: Pearson correlation matrix heat map. The different colors represent Pearson corr
23 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
971
views
Answer: Answer: Clustered, annotated dotplot to scRNA-Seq data
23 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
2.0k
views
Comment: Comment: ESTIMATE tumor purity
23 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
2.0k
views
Answer: Answer: ESTIMATE tumor purity
23 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
2.9k
views
Answer: Answer: What to do with Seurat metadata and counts in separate text files?
23 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.1k
views
Answer: Answer: How to add Ensembl id to cluster.markers in Seurat
23 months ago by fracarb8 ★ 1.6k
205 results • Page 2 of 5
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6