Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
Showing : comments
0
votes
1
reply
397
views
Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
4 days ago by fracarb8 ★ 1.6k
0
votes
1
reply
397
views
Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
5 days ago by fracarb8 ★ 1.6k
2
votes
1
reply
393
views
Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
4 weeks ago by fracarb8 ★ 1.6k
0
votes
1
reply
337
views
Comment: Comment: Addmetadata to seurat obj
5 weeks ago by fracarb8 ★ 1.6k
2
votes
0
replies
329
views
Comment: Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by fracarb8 ★ 1.6k
0
votes
0
replies
321
views
Comment: Comment: cloupe to 10x format
6 weeks ago by fracarb8 ★ 1.6k
2
votes
1
reply
368
views
Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
8 weeks ago by fracarb8 ★ 1.6k
2
votes
1
reply
311
views
Comment: Comment: compare dimplot(single cell)
8 weeks ago by fracarb8 ★ 1.6k
0
votes
0
replies
550
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
1
vote
1
reply
550
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
0
votes
1
reply
550
views
Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
1
vote
1
reply
324
views
Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
10 weeks ago by fracarb8 ★ 1.6k
0
votes
0
replies
328
views
Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
11 weeks ago by fracarb8 ★ 1.6k
0
votes
1
reply
440
views
Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
12 weeks ago by fracarb8 ★ 1.6k
0
votes
1
reply
590
views
Comment: Comment: Is it necessary to integrate again samples when subclustering
3 months ago by fracarb8 ★ 1.6k
2
votes
1
reply
1.0k
views
Comment: Comment: How to remove center population from seurat cluster
5 months ago by fracarb8 ★ 1.6k
2
votes
2
replies
1.0k
views
Comment: Comment: How to remove center population from seurat cluster
5 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
453
views
Comment: Comment: convert dataframe R
5 months ago by fracarb8 ★ 1.6k
2
votes
0
replies
2.6k
views
Comment: Comment: Cellcyclescoring did not work in Seurat V5
5 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
498
views
Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
5 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
972
views
Comment: Comment: Unable to save plots in R using jpeg() or png()
7 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
2.7k
views
Comment: Comment: Code for reading h5ad files in R
7 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
428
views
Comment: Comment: Monocle3 garnett
7 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
568
views
Comment: Comment: How to determine the total count for each gene in lymphotype B
7 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
568
views
Comment: Comment: How to determine the total count for each gene in lymphotype B
7 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
406
views
Comment: Comment: Is it normal if regress out the cell cycle effects but the DEGs are quite the si
7 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
657
views
Comment: Comment: Dotplot error: subscript out of bound
8 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.3k
views
Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
8 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.3k
views
Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
8 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
677
views
Comment: Comment: Converting scMultiome data to loom using SEURAT
8 months ago by fracarb8 ★ 1.6k
1
vote
1
reply
900
views
Comment: Comment: Optimal number of features to use when integrate multi samples by Seurat in sc
8 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.6k
views
Comment: Comment: Negative Expression in RNA Assay on Dot Plot After SCT Transform
8 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.0k
views
Comment: Comment: Housekeeping genes scRNA seq
10 months ago by fracarb8 ★ 1.6k
0
votes
2
replies
1.6k
views
Comment: Comment: scrna seq analysis - doublets
10 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
929
views
Comment: Comment: How to introduce normalized and scaled seurat data into monocle 3?
11 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
983
views
Comment: Comment: Seurat PlotClusterTree together with heatmap of gene expression
12 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
601
views
Comment: Comment: Remove string from Seurat Object
13 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
21k
views
Comment: Comment: How to get subset of a Seurat object based on metadata?
13 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
1.2k
views
Comment: Comment: Getting unspliced counts for scRNA-seq data generated from cellranger aggr pipel
14 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
2.2k
views
Comment: Comment: How to solve a possible memory issues with Seurat and IntegrateData step?
15 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.1k
views
Comment: Comment: How to use ClusterProfiler
15 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
413
views
Comment: Comment: Font name used in dittoSeq?
15 months ago by fracarb8 ★ 1.6k
2
votes
1
reply
640
views
Comment: Comment: R bug during normalize
15 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
764
views
Comment: Comment: HLA typing with archasHLA - DNA seq?
16 months ago by fracarb8 ★ 1.6k
1
vote
0
replies
873
views
Comment: Comment: bash script error to copy files from multiple directories to one directory
17 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
1.2k
views
Comment: Comment: How can I convert -log10 (p-value) to p-value?
18 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
832
views
Comment: Comment: How to deal with "///" in between gene symbols?
18 months ago by fracarb8 ★ 1.6k
0
votes
1
reply
1.7k
views
Comment: Comment: Tuning seurat integration strength to prevent overcorrection
20 months ago by fracarb8 ★ 1.6k
0
votes
0
replies
2.2k
views
Comment: Comment: Any script that can produce different mutations of protein sequences at specifie
21 months ago by fracarb8 ★ 1.6k
0
votes
2
replies
2.4k
views
Comment: Comment: scRNA read count is in csv, not '.h5ad' format, do I need to convert it into Ann
21 months ago by fracarb8 ★ 1.6k
108 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6