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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
5 days ago by fracarb8 ★ 1.6k
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407
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Comment: Comment: Adata.raw.X in LIANA, something wrong with conversion from Seurat to adata in py
7 days ago by fracarb8 ★ 1.6k
2
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1
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399
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Comment: Comment: I'm new to cell ranger. Can single cells prepared with a protocol other than the
4 weeks ago by fracarb8 ★ 1.6k
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1
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338
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Comment: Comment: Addmetadata to seurat obj
5 weeks ago by fracarb8 ★ 1.6k
2
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331
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Comment: Comment: Ubuntu storage space is decreasing automatically
5 weeks ago by fracarb8 ★ 1.6k
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0
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327
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Comment: Comment: cloupe to 10x format
6 weeks ago by fracarb8 ★ 1.6k
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327
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Answer: Answer: cloupe to 10x format
6 weeks ago by fracarb8 ★ 1.6k
2
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1
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480
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Answer: Answer: change order of violin plots in ggplot2
updated 8 weeks ago by 43k • written 8 weeks ago by ★ 1.6k
1
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1
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790
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Answer: Answer: Subsetting Seurat object based on list of cell barcodes
8 weeks ago by fracarb8 ★ 1.6k
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0
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549
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Answer: Answer: ArchR Doublet Inference to Signac
8 weeks ago by fracarb8 ★ 1.6k
2
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1
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370
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Comment: Comment: Seeking help with Tcga Target Gtex Expected Count Data
9 weeks ago by fracarb8 ★ 1.6k
2
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1
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314
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Comment: Comment: compare dimplot(single cell)
9 weeks ago by fracarb8 ★ 1.6k
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292
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Answer: Answer: Doplot to display 2 metadata variables
9 weeks ago by fracarb8 ★ 1.6k
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559
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
1
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1
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559
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
0
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1
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559
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Comment: Comment: Is there anyone who downloaded Azimuth packges?
9 weeks ago by fracarb8 ★ 1.6k
0
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0
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339
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Answer: Answer: Error in changing the annotation color of pheatmap
9 weeks ago by fracarb8 ★ 1.6k
1
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1
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326
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Comment: Comment: Seeking Guidance on How to Annotate Unusual Cell Populations in Single-Cell Data
11 weeks ago by fracarb8 ★ 1.6k
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0
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652
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Answer: Answer: Downsampling of cells in scRNAseq DE analysis
11 weeks ago by fracarb8 ★ 1.6k
1
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0
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311
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Answer: Answer: getting error when transfer labels for my scRNAseq data using FindTransferAnchor
11 weeks ago by fracarb8 ★ 1.6k
0
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0
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328
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Comment: Comment: How to manually sort the legend of gseaplot2 (enrichplot, clusterProfiler) resul
11 weeks ago by fracarb8 ★ 1.6k
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0
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358
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Answer: Answer: Speed up FindClusters execution?
11 weeks ago by fracarb8 ★ 1.6k
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1
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442
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Comment: Comment: DE Analysis Between A Subset Seurat Object Versus Original Seurat Object
12 weeks ago by fracarb8 ★ 1.6k
1
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1
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1.9k
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Answer: Answer: JoinLayers to find markers in merged or integrated analysis in seurat
3 months ago by fracarb8 ★ 1.6k
0
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1
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596
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Comment: Comment: Is it necessary to integrate again samples when subclustering
4 months ago by fracarb8 ★ 1.6k
0
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0
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653
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Answer: Answer: Monocle3 gene expression dot plot with a cell data set object (need help with re
4 months ago by fracarb8 ★ 1.6k
2
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1
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1.0k
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Comment: Comment: How to remove center population from seurat cluster
5 months ago by fracarb8 ★ 1.6k
2
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2
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1.0k
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Comment: Comment: How to remove center population from seurat cluster
5 months ago by fracarb8 ★ 1.6k
0
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1
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454
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Comment: Comment: convert dataframe R
5 months ago by fracarb8 ★ 1.6k
2
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1
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454
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Answer: Answer: convert dataframe R
5 months ago by fracarb8 ★ 1.6k
2
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0
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2.6k
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Comment: Comment: Cellcyclescoring did not work in Seurat V5
5 months ago by fracarb8 ★ 1.6k
0
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1
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499
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Comment: Comment: labelling the clusters from the CD4 T cell scRNAseq data
5 months ago by fracarb8 ★ 1.6k
0
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0
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1.9k
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Answer: Answer: DoubletFinder for Python?
5 months ago by fracarb8 ★ 1.6k
2
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0
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934
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Answer: Answer: How to 'organize' multiple umap/genes generates with Seurat `FeaturePlot`in a sp
6 months ago by fracarb8 ★ 1.6k
1
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0
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434
views
Answer: Answer: seurat-creating heatmaps
7 months ago by fracarb8 ★ 1.6k
0
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1
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988
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Comment: Comment: Unable to save plots in R using jpeg() or png()
7 months ago by fracarb8 ★ 1.6k
2
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1
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1.3k
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Answer: Answer: Bioinformatics software for single cell omics
7 months ago by fracarb8 ★ 1.6k
0
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0
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2.7k
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Comment: Comment: Code for reading h5ad files in R
7 months ago by fracarb8 ★ 1.6k
0
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1
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2.7k
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Answer: Answer: Code for reading h5ad files in R
7 months ago by fracarb8 ★ 1.6k
0
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0
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430
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Comment: Comment: Monocle3 garnett
7 months ago by fracarb8 ★ 1.6k
1
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0
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626
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Answer: Answer: How to get ncol = nrow?
updated 7 months ago by 43k • written 7 months ago by ★ 1.6k
1
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1
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569
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Comment: Comment: How to determine the total count for each gene in lymphotype B
7 months ago by fracarb8 ★ 1.6k
0
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1
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569
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Comment: Comment: How to determine the total count for each gene in lymphotype B
7 months ago by fracarb8 ★ 1.6k
1
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1
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407
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Comment: Comment: Is it normal if regress out the cell cycle effects but the DEGs are quite the si
7 months ago by fracarb8 ★ 1.6k
1
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0
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1.4k
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Answer: Answer: Is there an easy to modify the subplot titles in DimPlot (Seurat)?
updated 8 months ago by 43k • written 8 months ago by ★ 1.6k
2
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0
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789
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Answer: Answer: Add samples IDs to Seurat object when integrating different samples to do differ
updated 8 months ago by 43k • written 8 months ago by ★ 1.6k
1
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1
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657
views
Comment: Comment: Dotplot error: subscript out of bound
8 months ago by fracarb8 ★ 1.6k
1
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0
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1.6k
views
Answer: Answer: How do I install DSSP?
8 months ago by fracarb8 ★ 1.6k
0
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0
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1.3k
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Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
8 months ago by fracarb8 ★ 1.6k
0
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1
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1.3k
views
Comment: Comment: Selecting MOUSE gene set libraries in Enrichr
8 months ago by fracarb8 ★ 1.6k
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