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2
votes
2
replies
706
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Is there any tutorial page that tells you how to extract read count from illumina single-cell RNAseq fastq file?
illumina scRNA-seq
2.0 years ago by Simon Ahn ▴ 10
2
votes
2
replies
575
views
Is there any way to make p-value high if correlation has negative value?
correlation p-value
2.4 years ago by Simon Ahn ▴ 10
0
votes
0
replies
407
views
What does it mean by "fitted to a normal distribution and a threshold of p < 0.001"?
normal statstic distribution
2.5 years ago by Simon Ahn ▴ 10
0
votes
4
replies
994
views
How to get DEGs compare one sample to another?
DESeq2 DEG
updated 2.5 years ago by ▴ 790 • written 2.5 years ago by ▴ 10
1
vote
0
replies
931
views
Questions on Seurat AddModuleScore function
AddModuleScore Seurat single-cell
2.5 years ago by Simon Ahn ▴ 10
0
votes
0
replies
396
views
How should I normalize read count without any metadata or reading depth?
single-cell normalization
2.5 years ago by Simon Ahn ▴ 10
3
votes
2
replies
933
views
How should I deal with my RNAseq result with high % of mutiple aligned reads?
RNAseq raw-count fastq
updated 2.6 years ago by 8.7k • written 2.6 years ago by ▴ 10
0
votes
2
replies
1.4k
views
How to deal with high % of reads mapped to multiple loci on STAR?
RNAseq fastq raw-count
2.6 years ago by Simon Ahn ▴ 10
4
votes
2
replies
945
views
How should I align my single-end fastq file?
RNAseq raw-count fastq
updated 2.6 years ago by ▴ 80 • written 2.6 years ago by ▴ 10
1
vote
5
replies
1.3k
views
Low assigned alignments
fastq-alignment RNAseq raw-count
2.6 years ago by Simon Ahn ▴ 10
3
votes
3
replies
1.2k
views
Paired-end reads somehow counted twice?
RNAseq raw-count fastq
updated 2.6 years ago by 142k • written 2.6 years ago by ▴ 10
2
votes
2
replies
964
views
bowtie2 and then HISAT2? What does it mean in Data processing details on a paper?
RNAseq fastq raw-count
updated 2.6 years ago by ▴ 410 • written 2.6 years ago by ▴ 10
6
votes
5
replies
1.3k
views
I'm not sure my Bulk RNAseq read counts extracted from fastq file are correct
fastq RNAseq raw-count
updated 2.6 years ago by 21k • written 2.6 years ago by ▴ 10
0
votes
0
replies
485
views
How can I be sure that raw read counts are well processed from fastq files?
fastq RNAseq raw-count
2.6 years ago by Simon Ahn ▴ 10
2
votes
1
reply
945
views
Making a Group Tree using RNA-seq Read Count in R
R RNA-Seq
updated 11 months ago by 44k • written 5.1 years ago by ▴ 10
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