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Answer: Answer: How/where can I get fungal mitogenome data for analysis?
9 days ago by alex.zaccaron ▴ 410
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471
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Answer: Answer: How to add exon annotations to genome annotation
5 months ago by alex.zaccaron ▴ 410
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1
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415
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Comment: Comment: error in determining minimum contigs in Velvet
6 months ago by alex.zaccaron ▴ 410
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794
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Answer: Answer: Why is my genome assembly not aligning well?
8 months ago by alex.zaccaron ▴ 410
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2
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1.2k
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Answer: Answer: Short Read Data Genome Assembly
8 months ago by alex.zaccaron ▴ 410
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913
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Comment: Comment: CAZy database has multiple family sequence...
8 months ago by alex.zaccaron ▴ 410
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584
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Comment: Comment: Specific databases for NRPS and RiPP annotation
2.1 years ago by alex.zaccaron ▴ 410
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1
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2.3k
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Answer: Answer: bedtools intersect error: Invalid record in file
2.4 years ago by alex.zaccaron ▴ 410
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1.1k
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Comment: Comment: Question for Splice variants and Alternative splicing
2.5 years ago by alex.zaccaron ▴ 410
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4.9k
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Answer: Answer: conda error
2.6 years ago by alex.zaccaron ▴ 410
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1
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1.2k
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Answer: Answer: How to pipe awk of bed file into samtools to extract fasta sequences?
2.7 years ago by alex.zaccaron ▴ 410
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943
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Comment: Comment: Sum values in a row and compare the results to a value with awk or sed
2.7 years ago by alex.zaccaron ▴ 410
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1.4k
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Comment: Comment: Seeking simple HiC mapping and visualization tutorial for small genome
2.7 years ago by alex.zaccaron ▴ 410
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1.4k
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Answer: Answer: bash script
2.7 years ago by alex.zaccaron ▴ 410
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1
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1.1k
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Comment: Comment: Exonerate - issues when running it
2.8 years ago by alex.zaccaron ▴ 410
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540
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Comment: Comment: Checking for gene expression in transcriptome - 1 sample RNASeq
2.9 years ago by alex.zaccaron ▴ 410
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1.4k
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Comment: C: Interpreting first round of maker
3.2 years ago by alex.zaccaron ▴ 410
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1.6k
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Comment: C: Convert .sqn file to .gbk
3.2 years ago by alex.zaccaron ▴ 410
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1.2k
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Comment: C: How to check for completeness of a mitochondrial or chloroplast genome?
3.2 years ago by alex.zaccaron ▴ 410
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3.7k
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Comment: C: mummer dot plot
3.2 years ago by alex.zaccaron ▴ 410
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1
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3.7k
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Comment: C: mummer dot plot
3.2 years ago by alex.zaccaron ▴ 410
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0
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964
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Comment: C: Pac bio assembler
3.3 years ago by alex.zaccaron ▴ 410
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839
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Answer: C: Analysis of host-parasite mixed transcriptome
3.9 years ago by alex.zaccaron ▴ 410
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1.5k
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Comment: C: Why the Trimmomatic does not remove some adapters? How do I add a new sequence t
3.9 years ago by alex.zaccaron ▴ 410
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1.1k
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Comment: C: Error downloading streams from SRA-ncbi when running fastq-dump
4.0 years ago by alex.zaccaron ▴ 410
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1
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2.6k
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Comment: C: Correct gtf file format (AGAT toolkit)
4.0 years ago by alex.zaccaron ▴ 410
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0
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3.7k
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Comment: C: Too many unmapped reads - STAR alignment
4.0 years ago by alex.zaccaron ▴ 410
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1
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1.7k
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Comment: C: Gene prediction programs predicting different genes
4.0 years ago by alex.zaccaron ▴ 410
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1
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1.7k
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Answer: C: Gene prediction programs predicting different genes
4.0 years ago by alex.zaccaron ▴ 410
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2.2k
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Answer: A: TransDecoder in Linux
4.0 years ago by alex.zaccaron ▴ 410
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0
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1.2k
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Comment: C: How can I fix frameshift errors in assembled genome?
4.2 years ago by alex.zaccaron ▴ 410
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0
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909
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Comment: C: Contig longer than mitochondrial sequence. Explanation ?
4.3 years ago by alex.zaccaron ▴ 410
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2
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1.9k
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Comment: C: Extract N amino acids from fasta file
4.4 years ago by alex.zaccaron ▴ 410
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0
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1.9k
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Comment: C: Extract N amino acids from fasta file
4.4 years ago by alex.zaccaron ▴ 410
2
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1.9k
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Comment: C: Why map reads back to assembly?
4.5 years ago by alex.zaccaron ▴ 410
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0
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2.0k
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Comment: C: Polish PacBio assembly with Hi-C reads
4.5 years ago by alex.zaccaron ▴ 410
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1.2k
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Comment: C: How to minimize chimeric transcripts assembled with StringTie
4.6 years ago by alex.zaccaron ▴ 410
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1
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1.2k
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How to minimize chimeric transcripts assembled with StringTie
stringtie rna-seq transcriptome
4.6 years ago by alex.zaccaron ▴ 410
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1
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3.5k
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Comment: C: Assembly statistics: abyss & bbmap
4.6 years ago by alex.zaccaron ▴ 410
1
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1
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3.5k
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Comment: C: Assembly statistics: abyss & bbmap
4.6 years ago by alex.zaccaron ▴ 410
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2
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3.9k
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Comment: C: Converting an output de-novo transcriptome assembled with Trinity to a .gff3 fil
4.6 years ago by alex.zaccaron ▴ 410
4
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0
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2.7k
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Answer: C: Filtering BED file for interval length
4.6 years ago by alex.zaccaron ▴ 410
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3.7k
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Comment: C: mummer dot plot
4.7 years ago by alex.zaccaron ▴ 410
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3.7k
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Comment: C: mummer dot plot
4.7 years ago by alex.zaccaron ▴ 410
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1.3k
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Comment: C: Is it much better to use 3rd generation full-length transcriptome than 2nd when
4.7 years ago by alex.zaccaron ▴ 410
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1
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1.7k
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Comment: C: How to compare two files and grep one smaller and greater numbers
4.7 years ago by alex.zaccaron ▴ 410
3
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1
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2.4k
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Answer: C: Fasta extraction from bed file
4.8 years ago by alex.zaccaron ▴ 410
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1
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2.0k
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Comment: C: Polish PacBio assembly with Hi-C reads
4.8 years ago by alex.zaccaron ▴ 410
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4
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2.0k
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Polish PacBio assembly with Hi-C reads
assembly sequencing
4.8 years ago by alex.zaccaron ▴ 410
0
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0
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1.7k
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Comment: C: "count"in the snpEFF html output
5.5 years ago by alex.zaccaron ▴ 410
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