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Answer: Answer: Is reciprocal best hit method applicable for non-coding RNA to find orthologs?
10 months ago by Andrzej Zielezinski 11k
4
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777
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Answer: Answer: Tool for aligning short protein sequences
15 months ago by Andrzej Zielezinski 11k
2
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683
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Answer: Answer: Choosing right statistical test in genomics
15 months ago by Andrzej Zielezinski 11k
2
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1
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1.2k
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Answer: Answer: Global Alignment
15 months ago by Andrzej Zielezinski 11k
3
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1
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3.0k
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Answer: Answer: fasta sequences into non-overlapping k-mers using python
18 months ago by Andrzej Zielezinski 11k
3
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1
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1.2k
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Answer: Answer: Extracting k-mer counts from multiple genome sequence files
18 months ago by Andrzej Zielezinski 11k
4
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2
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1.1k
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Answer: Answer: Filtering a fasta file based on blast results file
18 months ago by Andrzej Zielezinski 11k
3
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1
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3.9k
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Answer: Answer: How to delete spaces in rows from csv file in Python
18 months ago by Andrzej Zielezinski 11k
2
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1
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2.3k
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Answer: Answer: Parsing a genebank file and tsv file - extracting and outputting specific data t
19 months ago by Andrzej Zielezinski 11k
3
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1
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965
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Answer: Answer: Number of sequences in RefSeq.
19 months ago by Andrzej Zielezinski 11k
2
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1
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899
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Answer: Answer: Parsing a genbank file and outputting specific feature information to a csv usin
19 months ago by Andrzej Zielezinski 11k
3
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1
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660
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Answer: Answer: extracting data from genbank file
19 months ago by Andrzej Zielezinski 11k
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1
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1.7k
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Answer: Answer: From fastq files to fasta
19 months ago by Andrzej Zielezinski 11k
2
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0
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886
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Answer: Answer: how to filter fasta file?
19 months ago by Andrzej Zielezinski 11k
3
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1
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2.1k
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Answer: Answer: Sequence identity between two protein sequences
20 months ago by Andrzej Zielezinski 11k
5
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2
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1.2k
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Answer: Answer: Python complex formula using the items of a dictionary (or a list of dictionarie
20 months ago by Andrzej Zielezinski 11k
4
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1
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667
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Answer: Answer: Advanced search for the sequences on NCBI website
21 months ago by Andrzej Zielezinski 11k
4
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0
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838
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Answer: Answer: How a fastq.gz file is formatted?
21 months ago by Andrzej Zielezinski 11k
3
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1
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1.3k
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Answer: Answer: How can I remove the sequences that contain ambiogous amino acids from a multipl
21 months ago by Andrzej Zielezinski 11k
3
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0
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1.1k
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Answer: Answer: Precision-recall curve to compare metagenome classifiers to a gold standard - Is
21 months ago by Andrzej Zielezinski 11k
4
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1
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1.4k
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Answer: Answer: Only getting 25 results from UniProt REST ID Mapping
22 months ago by Andrzej Zielezinski 11k
4
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1
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1.2k
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Answer: Answer: UniProt REST Mapping Problem
22 months ago by Andrzej Zielezinski 11k
0
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1
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830
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Answer: Answer: virus classification
2.2 years ago by Andrzej Zielezinski 11k
2
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1
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899
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Answer: Answer: Too Many Protein Sequences To Align, Advice?
2.2 years ago by Andrzej Zielezinski 11k
2
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1
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1.4k
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Answer: Answer: proteins global alignment using BLOSUM80
2.4 years ago by Andrzej Zielezinski 11k
4
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1
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3.1k
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Answer: Answer: Sorting and writing multifasta entries to new fasta files
2.7 years ago by Andrzej Zielezinski 11k
4
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1
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1.5k
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Answer: Answer: Flipping a DNA sequence (not reverse complementing) using command line/samtools?
2.7 years ago by Andrzej Zielezinski 11k
1
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1
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2.1k
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Answer: Answer: How to find the fasta file with maxium number of amino acids?
2.9 years ago by Andrzej Zielezinski 11k
2
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0
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634
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Answer: A: How do I make my code go through all through my list in my file.
3.1 years ago by Andrzej Zielezinski 11k
5
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1
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868
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Answer: C: blastn with short sequences gives no results in the corresponding genome
3.3 years ago by Andrzej Zielezinski 11k
4
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1
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1.2k
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Answer: A: Get closest taxa of a target species in a phylogeny
3.4 years ago by Andrzej Zielezinski 11k
21
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0
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29k
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Answer: A: Difference between NCBI non-redundant and refseq database
3.5 years ago by Andrzej Zielezinski 11k
3
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0
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1.0k
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Answer: A: Need help with Pairwise Alignment module in iterating over the alignment
3.5 years ago by Andrzej Zielezinski 11k
1
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1
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1.3k
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Answer: A: Printing for each specific sequence and its residue in msa , every msa position
3.6 years ago by Andrzej Zielezinski 11k
2
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1
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43k
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Answer: A: python 3.8 'No module named pip'
3.8 years ago by Andrzej Zielezinski 11k
2
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0
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2.8k
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Answer: A: Comparing multiple columns from 2 files using awk, perl or python
3.9 years ago by Andrzej Zielezinski 11k
6
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2
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2.1k
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Answer: A: ID query with entrez -- invalid ID - rllib.error.HTTPError: HTTP Error 400: Bad
3.9 years ago by Andrzej Zielezinski 11k
3
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0
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1.9k
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Answer: A: Script to obtain human protein sequences by the gene symbols
3.9 years ago by Andrzej Zielezinski 11k
1
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0
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1.5k
views
Answer: C: Makeblastdb refseq viral protein sequence (Blast db v5)
4.0 years ago by Andrzej Zielezinski 11k
1
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0
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2.0k
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Answer: A: Online pipeline for MSA and NJ tree generation bootstrap supported
4.1 years ago by Andrzej Zielezinski 11k
5
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0
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3.5k
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Answer: A: Reverse translate to all possible codons
4.1 years ago by Andrzej Zielezinski 11k
3
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1
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896
views
Answer: A: leafs in the MESH tree
4.2 years ago by Andrzej Zielezinski 11k
4
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0
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2.7k
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Answer: A: Biopython gives ValueError: Sequences must all be the same length even though se
4.2 years ago by Andrzej Zielezinski 11k
4
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1
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2.1k
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Answer: A: Download all bacterial proteins from the same family
updated 4.3 years ago by 43k • written 8.3 years ago by 11k
3
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0
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3.0k
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Answer: A: Using io.StringIO() with biopython Phylo parse
updated 4.3 years ago by 43k • written 8.3 years ago by 11k
4
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1
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1.6k
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Answer: A: Divergence time of all species compared to human
updated 4.3 years ago by 43k • written 8.3 years ago by 11k
3
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0
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17k
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Answer: A: How to split fasta into seperate files by chromosome (in the header)
updated 4.4 years ago by 43k • written 8.3 years ago by 11k
6
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1
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5.9k
views
Answer: A: Where have the bacterial genomes gone in Genbank ftp?
updated 4.4 years ago by 43k • written 8.3 years ago by 11k
2
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1
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4.8k
views
Answer: A: BLAST+ vs Web BLAST "Automatically adjust parameters for short input sequences"
updated 4.4 years ago by 43k • written 8.4 years ago by 11k
2
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0
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799
views
Answer: C: Append only sequence itself to list, no metadata
4.4 years ago by Andrzej Zielezinski 11k
187 results • Page 1 of 4
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