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3
votes
1
reply
682
views
Answer: Answer: Bacterial plasmid analysis
10 days ago by shenwei356 8.5k
0
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0
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495
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Comment: Comment: Rename multiple fastq.gz files
25 days ago by shenwei356 8.5k
0
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0
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619
views
Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
5 weeks ago by shenwei356 8.5k
1
vote
2
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619
views
Answer: Answer: Removing adapter/primer sequence from reads while keeping flanking regions
5 weeks ago by shenwei356 8.5k
0
votes
0
replies
417
views
Comment: Comment: Parsing fasta file by coordinates
6 weeks ago by shenwei356 8.5k
1
vote
1
reply
335
views
Comment: Comment: Seqkit Replace
8 weeks ago by shenwei356 8.5k
2
votes
1
reply
335
views
Answer: Answer: Seqkit Replace
8 weeks ago by shenwei356 8.5k
2
votes
1
reply
614
views
Comment: Comment: Max lenght reads from fastq
9 weeks ago by shenwei356 8.5k
0
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0
replies
202
views
Comment: Comment: Conda appears different than yesterday
3 months ago by shenwei356 8.5k
0
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0
replies
573
views
Comment: Comment: Blastn for all bacteria genomes; create the db
3 months ago by shenwei356 8.5k
0
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1
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573
views
Answer: Answer: Blastn for all bacteria genomes; create the db
3 months ago by shenwei356 8.5k
7
votes
5
replies
4.8k
views
How to get consensus FASTA sequence from GFA assembly graph?
gfa consensus
updated 3 months ago by ▴ 40 • written 5.4 years ago by 8.5k
0
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0
replies
198
views
Comment: Comment: Calculating percentage of reads mapped to a reference genome
4 months ago by shenwei356 8.5k
3
votes
1
reply
768
views
Answer: Answer: Renaming fasta files with their headers
5 months ago by shenwei356 8.5k
0
votes
1
reply
490
views
Comment: Comment: Species coverage in the NCBI protein NR database ?
5 months ago by shenwei356 8.5k
0
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0
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490
views
Comment: Comment: Species coverage in the NCBI protein NR database ?
5 months ago by shenwei356 8.5k
5
votes
0
replies
592
views
Answer: Answer: how to sort fasta file accroding to header
5 months ago by shenwei356 8.5k
0
votes
1
reply
1.9k
views
Comment: Comment: How to limit fasta header to 40 characters?
8 months ago by shenwei356 8.5k
13
votes
6
replies
5.2k
views
Tool: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
CSV Golang TSV
9 months ago by shenwei356 8.5k
1
vote
0
replies
5.2k
views
Answer: Answer: csvtk - a cross-platform, efficient, practical and pretty CSV/TSV toolkit
9 months ago by shenwei356 8.5k
0
votes
0
replies
25k
views
Comment: Comment: searching reads with a certain sequence in fastq file
10 months ago by shenwei356 8.5k
0
votes
1
reply
543
views
Answer: Answer: Question about sequence alignment
10 months ago by shenwei356 8.5k
3
votes
0
replies
847
views
Answer: Answer: How to extract sequences from multiple fastq files based on a certain sequence
10 months ago by shenwei356 8.5k
2
votes
0
replies
1.0k
views
Answer: Answer: Bash solution to replace part of FASTA headers witch contain matching values in
10 months ago by shenwei356 8.5k
1
vote
0
replies
1.9k
views
Answer: Answer: Getting sequences from fastq file using Grep command
11 months ago by shenwei356 8.5k
2
votes
0
replies
697
views
Answer: Answer: how to sort unique seq from fasta files
11 months ago by shenwei356 8.5k
0
votes
1
reply
14k
views
Comment: Comment: How to concatenate multiple fasta file
11 months ago by shenwei356 8.5k
2
votes
1
reply
1.1k
views
Comment: Comment: how to use nohup with parallel
11 months ago by shenwei356 8.5k
0
votes
1
reply
955
views
Answer: Answer: Add a genome to a kraken library
11 months ago by shenwei356 8.5k
2
votes
0
replies
508
views
Answer: Answer: Randomly reduce size of reads but preserving the distribution
12 months ago by shenwei356 8.5k
4
votes
1
reply
1.7k
views
Answer: Answer: Compare two very close genomes (.fasta)
13 months ago by shenwei356 8.5k
1
vote
1
reply
669
views
Answer: Answer: How to identify Gap location
13 months ago by shenwei356 8.5k
2
votes
0
replies
429
views
Answer: Answer: I need a tool that allows me to see a whole genome and point out previously anno
13 months ago by shenwei356 8.5k
2
votes
0
replies
1.0k
views
Answer: Answer: how to rename or time bunch of file names in fasta file
13 months ago by shenwei356 8.5k
0
votes
1
reply
518
views
Answer: Answer: genome annotation [sstart] [send] - how to get protein sequence from gene
13 months ago by shenwei356 8.5k
1
vote
0
replies
2.1k
views
Comment: Comment: Editting fasta headers
13 months ago by shenwei356 8.5k
1
vote
0
replies
2.1k
views
Comment: Comment: Editting fasta headers
13 months ago by shenwei356 8.5k
2
votes
0
replies
1.5k
views
Comment: Comment: split fasta file to train deep learning model
13 months ago by shenwei356 8.5k
3
votes
1
reply
1.5k
views
Comment: Comment: split fasta file to train deep learning model
13 months ago by shenwei356 8.5k
6
votes
0
replies
1.5k
views
Answer: Answer: how to edit fasta header
14 months ago by shenwei356 8.5k
0
votes
0
replies
1.2k
views
Answer: Answer: command line - how to change name of multiple files at the same time
15 months ago by shenwei356 8.5k
0
votes
0
replies
1.9k
views
Comment: Comment: batch renaming FASTQ files
15 months ago by shenwei356 8.5k
2
votes
0
replies
662
views
Comment: Comment: 30 bp sequence that does not show hit within a genome
16 months ago by shenwei356 8.5k
2
votes
0
replies
618
views
Answer: Answer: bash/awk code to comapre tables
16 months ago by shenwei356 8.5k
1
vote
0
replies
1.4k
views
Comment: Comment: retrieve amplicon sequences from fna file
17 months ago by shenwei356 8.5k
1
vote
1
reply
1.7k
views
Comment: Comment: How to determine the encoding method of quality score in a fastaq file?
17 months ago by shenwei356 8.5k
1
vote
1
reply
672
views
Answer: Answer: How to reduce RNA_from_genomic file to just gene name and sequence
18 months ago by shenwei356 8.5k
2
votes
0
replies
1.3k
views
Answer: Answer: How to add column name to each cell using bash?
18 months ago by shenwei356 8.5k
3
votes
1
reply
2.3k
views
Answer: Answer: fasta extract using seqkit grep regex pattern
18 months ago by shenwei356 8.5k
0
votes
1
reply
1.9k
views
Comment: Comment: Renaming sequencing libraries
19 months ago by shenwei356 8.5k
761 results • Page 1 of 16
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