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Makplus T
Makplus T
Reputation:
100
Joined:
8.4 years ago
Last seen:
6.0 years ago

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Latest posts by user
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Comment: C: Getting huge size of CNV region from CNV-kit with hybrid data.
written by Makplus T Makplus T
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2 replies
1.6K views
Getting huge size of CNV region from CNV-kit with hybrid data.
cnv wes cnvkit
written by Makplus T Makplus T
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0 replies
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Comment: C: Confused about the AF tag in VCF from samtools/bcftools mpileup
written by Makplus T Makplus T
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Comment: C: Confused about the AF tag in VCF from samtools/bcftools mpileup
written by Makplus T Makplus T
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1 reply
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Comment: C: How to explain that mutations called by Mutect2 are inconsistent with what I saw
written by Makplus T Makplus T
2 votes
4 replies
7.5K views
Confused about the AF tag in VCF from samtools/bcftools mpileup
variants af vcf samtools gatk
updated by Renesh Renesh • written by Makplus T Makplus T
0 votes
6 replies
4.7K views
How to explain that mutations called by Mutect2 are inconsistent with what I saw in iGV?
igv gatk mutect2 mutation
updated by davidben • davidben • written by Makplus T Makplus T
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Comment: C: will C-base re-synthesize during PCR in Bisulfite methylation sequence
written by Makplus T Makplus T
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1 reply
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Comment: C: will C-base re-synthesize during PCR in Bisulfite methylation sequence
written by Makplus T Makplus T
0 votes
4 replies
1.5K views
will C-base re-synthesize during PCR in Bisulfite methylation sequence
bisulfite methylation
written by Makplus T Makplus T
2 votes
0 replies
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Answer: A: Volcano plot: why is there big FC with big p-values?
written by Makplus T Makplus T
2 votes
0 replies
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Answer: A: Determine adapter sequence in RNA-seq samples
written by Makplus T Makplus T
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0 replies
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Comment: C: Why DP and GT info in my VCF file are inconsistent?
written by Makplus T Makplus T
0 votes
2 replies
1.7K views
Why DP and GT info in my VCF file are inconsistent?
gatk vcf format
updated by Biostar Biostar • written by Makplus T Makplus T
0 votes
0 replies
1.7K views
What is the different if I call germline SNP/Indel with mutect and HaplotypeCaller?
gatk mutect haplotypecaller.
written by Makplus T Makplus T
1 vote
0 replies
0 views
Comment: C: How Can I Get The Human Chromosome Centromere Position And Chromosome Length In
written by Makplus T Makplus T
0 votes
0 replies
216 views
How to use MutSigCV with hg38 data?
mutsigcv driver mutation
written by Makplus T Makplus T
0 votes
1 reply
1 view
Comment: C: Are there any way to find DMR with the data in TCGA methylation level3?
written by Makplus T Makplus T
1 vote
1 reply
14K views
should FASTA files be sorted before indexed with SAMtools?
samtools fasta sort index
updated by finswimmer finswimmer • written by Makplus T Makplus T
0 votes
4 replies
2.6K views
Are there any way to find DMR with the data in TCGA methylation level3?
tcga methylation 450k dmr
updated by Kevin Blighe Kevin Blighe • written by Makplus T Makplus T
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