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Comment: A: RepeatModeler:Input has potential formatting error
3.2 years ago by tothepoint ▴ 800
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4.2k
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Comment: C: How to convert gvcf file to normal vcf file ?
3.2 years ago by tothepoint ▴ 800
3
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1
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4.2k
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Answer: A: How to convert gvcf file to normal vcf file ?
3.2 years ago by tothepoint ▴ 800
0
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1
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799
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SNPs id conversion from one database to another
SNP genome assembly Genotyping
3.2 years ago by tothepoint ▴ 800
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0
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799
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Answer: A: SNPs id conversion from one database to another
3.2 years ago by tothepoint ▴ 800
0
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2
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659
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Answer: A: How can I locate a specific nucleotide based on a bam file?
3.2 years ago by tothepoint ▴ 800
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1
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3.0k
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Answer: A: Is there any method to convert a text file to VCF format?
3.2 years ago by tothepoint ▴ 800
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0
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2.4k
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Comment: C: Ubuntu 20.04.1 for genomic data analysis
3.2 years ago by tothepoint ▴ 800
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2
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2.4k
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Answer: A: Ubuntu 20.04.1 for genomic data analysis
3.2 years ago by tothepoint ▴ 800
1
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1
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1.9k
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Comment: C: gzip: uniprot_sprot_human.dat.gz: not in gzip format
3.3 years ago by tothepoint ▴ 800
1
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0
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2.9k
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Comment: C: Interpreting nucleotide diversity
3.3 years ago by tothepoint ▴ 800
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1
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4.2k
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Comment: C: How to remove illumina universal adapter
3.3 years ago by tothepoint ▴ 800
2
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0
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5.2k
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Answer: A: How to remove chr from VCF file
3.3 years ago by tothepoint ▴ 800
0
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1
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5.2k
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Comment: C: How to remove chr from VCF file
3.3 years ago by tothepoint ▴ 800
0
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2
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5.9k
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Answer: A: How to create interval list from reference fasta or dict file?
3.3 years ago by tothepoint ▴ 800
1
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0
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4.1k
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Answer: A: Principle component analysis using VCF file as input.
3.3 years ago by tothepoint ▴ 800
2
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1
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6.8k
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Answer: A: Merging multiple tsv files
3.3 years ago by tothepoint ▴ 800
1
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1
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743
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Comment: C: In methylation sequencing, what does BedGraph value stand for?
3.3 years ago by tothepoint ▴ 800
5
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1
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1.0k
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Methylation data analysis
RNA-Seq wgbs gene CpG
updated 3.3 years ago by ▴ 270 • written 3.4 years ago by ▴ 800
0
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1
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6.3k
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Comment: C: Combine two VCF files with GATK4
3.3 years ago by tothepoint ▴ 800
3
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2
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6.3k
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Answer: A: Combine two VCF files with GATK4
3.3 years ago by tothepoint ▴ 800
1
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0
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800
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Answer: A: Plotting the results (p-values) from various conditional GWAS
3.4 years ago by tothepoint ▴ 800
0
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0
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1.3k
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Answer: A: circos error - no change to housekeeping.conf
3.4 years ago by tothepoint ▴ 800
0
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0
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665
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Answer: C: Missing chromosomal Information after sorting and deduplication step
3.5 years ago by tothepoint ▴ 800
0
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1
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665
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Comment: C: Missing chromosomal Information after sorting and deduplication step
3.5 years ago by tothepoint ▴ 800
1
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1
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939
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Bismark methylation extract result interpretation
WGBS bismark methylation CpG
updated 3.5 years ago by ▴ 180 • written 3.5 years ago by ▴ 800
0
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0
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665
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Comment: C: Missing chromosomal Information after sorting and deduplication step
3.5 years ago by tothepoint ▴ 800
0
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5
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665
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Missing chromosomal Information after sorting and deduplication step
next-gen assembly sequence methylation
3.5 years ago by tothepoint ▴ 800
0
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1
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1.4k
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Answer: C: Post GWAS mapping SNPs to genes and calculating p-values
3.5 years ago by tothepoint ▴ 800
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0
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5.7k
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Answer: A: Creating assembly graphs .gfa
3.5 years ago by tothepoint ▴ 800
4
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1
reply
1.6k
views
RepeatMasker data download
RepeatMasker ucsc assembly
updated 3.6 years ago by 20 • written 4.2 years ago by ▴ 800
1
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0
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7.0k
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Comment: C: how to choose hub genes in wgcna
3.6 years ago by tothepoint ▴ 800
0
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1
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1.2k
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Comment: C: How to plot figure?
3.6 years ago by tothepoint ▴ 800
0
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1
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1.2k
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Comment: C: How to plot figure?
3.6 years ago by tothepoint ▴ 800
3
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6
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1.2k
views
How to plot figure?
Fst vcf wgs plot
3.1 years ago by tothepoint ▴ 800
2
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0
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12k
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Comment: C: Difference between padj and FDR
3.7 years ago by tothepoint ▴ 800
2
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1
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1.1k
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Answer: A: How does Linear regression works in gene-set analysis?
3.7 years ago by tothepoint ▴ 800
0
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0
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3.6k
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Comment: C: Combining VCF files using GATK
3.7 years ago by tothepoint ▴ 800
4
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8
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3.6k
views
Combining VCF files using GATK
WGS VCF GWAS
updated 3.7 years ago by • 0 • written 4.1 years ago by ▴ 800
4
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1
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4.9k
views
Answer: A: How to convert folder containing .fna.gz to normal files
3.7 years ago by tothepoint ▴ 800
1
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1
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4.9k
views
Answer: A: How to convert folder containing .fna.gz to normal files
3.7 years ago by tothepoint ▴ 800
1
vote
1
reply
1.0k
views
Geneid between regions of chromosome
biomaRt VEP Ensembl geneid
updated 3.8 years ago by ★ 2.4k • written 3.8 years ago by ▴ 800
1
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0
replies
7.6k
views
Answer: A: ENSEMBL Gene ID to Gene Symbol
3.8 years ago by tothepoint ▴ 800
0
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1
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3.3k
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Comment: C: Convert Logp value to P value
3.9 years ago by tothepoint ▴ 800
0
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0
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3.3k
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Comment: C: Convert Logp value to P value
3.9 years ago by tothepoint ▴ 800
9
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8
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3.3k
views
Convert Logp value to P value
snp csv R
updated 19 months ago by 43k • written 3.9 years ago by ▴ 800
3
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2
replies
5.8k
views
Modify chromosome name in fasta file
fasta chromosome genome name
updated 3.9 years ago by 20 • written 4.1 years ago by ▴ 800
0
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0
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526
views
How can I identify gene related to locus of certain chromosome.
vcf gene locus wgs selective sweep
4.0 years ago by tothepoint ▴ 800
3
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2
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2.0k
views
VCF file ID missing
SNP assembly VCF WGS
4.0 years ago by tothepoint ▴ 800
0
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0
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2.0k
views
Comment: C: VCF file ID missing
4.0 years ago by tothepoint ▴ 800
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