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rsafavi
rsafavi
Reputation:
60
Joined:
8.4 years ago
Last seen:
6.7 years ago
Latest posts by user
0 votes
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Comment: C: map TCGA methylation to CpG sites
written by rsafavi • rsafavi
0 votes
3 replies
547 views
map TCGA methylation to CpG sites
tcga methylation
written by rsafavi • rsafavi
0 votes
1 reply
1.2K views
going from the merged bam to original bam files
samtools bam merge
written by rsafavi • rsafavi
0 votes
1 reply
3.2K views
ValueError: Cannot convert a partially known TensorShape to a Tensor: (?, 1024)
keras tensorflow autoencoder
written by rsafavi • rsafavi
0 votes
1 reply
1.7K views
WGCNA Eigengene interpretation
wgcna eigengene clustering
written by rsafavi • rsafavi
0 votes
3 replies
3.1K views
HUGO and Ensembl ids
rna-seq single cell hugo ensembl
updated by EagleEye EagleEye • written by rsafavi • rsafavi
0 votes
1 reply
1 view
Comment: C: Why am I getting different ensembl gene ids for a given gene symbol?
written by rsafavi • rsafavi
1 vote
1 reply
1 view
Comment: C: Remove secondary alignments in RNA-seq analysis?
written by rsafavi • rsafavi
1 vote
0 replies
0 views
Answer: A: Get all the nucleotides from a bam file that is aligning to specific position in
written by rsafavi • rsafavi
0 votes
1 reply
0 views
Comment: C: Get all the nucleotides from a bam file that is aligning to specific position in
written by rsafavi • rsafavi
0 votes
6 replies
7.3K views
Get all the nucleotides from a bam file that is aligning to specific position in the genome
samtools pysam genome position alignment
updated by Kevin Blighe Kevin Blighe • written by rsafavi • rsafavi
0 votes
0 replies
1 view
Comment: C: Finding intergenic regions in bed file?
written by rsafavi • rsafavi
0 votes
1 reply
1 view
Comment: C: featureCounts for aligned reads
written by rsafavi • rsafavi
0 votes
0 replies
1 view
Comment: C: featureCounts for aligned reads
written by rsafavi • rsafavi
0 votes
5 replies
5.8K views
featureCounts for aligned reads
featurecounts rnaseq differential expression de
updated by GenoMax GenoMax • written by rsafavi • rsafavi
0 votes
0 replies
1.9K views
What is the difference between Repeat Masker and Window Masker from genom browser
repeatmasker windowmasker genombrowser
written by rsafavi • rsafavi
4 votes
1 reply
1 view
Answer: A: Filtering rRNA from RNAseq data
written by rsafavi • rsafavi
0 votes
0 replies
1 view
Comment: C: RNA-seq rRNA contamination
written by rsafavi • rsafavi
0 votes
0 replies
1 view
Comment: C: Filtering rRNA from RNAseq data
written by rsafavi • rsafavi
0 votes
10 replies
12K views
Filtering rRNA from RNAseq data
rna-seq rrna fastqc sortmerna
written by rsafavi • rsafavi
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