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amitgourav.ghosh12
amitgourav.ghosh12
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70
Joined:
8.5 years ago
Last seen:
3.9 years ago
Location:
Singapore
Latest posts by user
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Comment: C: Segmentation fault error while running extractPIRs from ShapeIT
written by amitgourav.ghosh12 amitgourav.ghosh12
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1 reply
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Comment: C: Segmentation fault error while running extractPIRs from ShapeIT
written by amitgourav.ghosh12 amitgourav.ghosh12
0 votes
1 reply
1.5K views
SNPduo error reading ped files
ibs genome snpduo ped
updated by muriel.grosb • muriel.grosb • written by amitgourav.ghosh12 amitgourav.ghosh12
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Comment: C: Replace missing SNPs of one individual with reference alleles in a VCF file
written by amitgourav.ghosh12 amitgourav.ghosh12
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Comment: C: Replace missing SNPs of one individual with reference alleles in a VCF file
written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
3 replies
2.2K views
Replace missing SNPs of one individual with reference alleles in a VCF file
snp bcftools vcftools sequencing
updated by zx8754 zx8754 • written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
4 replies
12K views
Change rsID to chromosome:location in bim files for plink
genome snp plink
updated by Corentin Corentin • written by amitgourav.ghosh12 amitgourav.ghosh12
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Comment: C: VCFtools: --window-pi and --from-bp --to-bp produces different start and ending
written by amitgourav.ghosh12 amitgourav.ghosh12
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0 replies
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Comment: C: Tajima's D Using SNP data ONLY
written by amitgourav.ghosh12 amitgourav.ghosh12
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0 replies
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Comment: C: How to do Tajima's D analysis?
written by amitgourav.ghosh12 amitgourav.ghosh12
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4 replies
4.2K views
How to do Tajima's D analysis?
snp genome
updated by Mensur Dlakic Mensur Dlakic • written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
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1 reply
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
1 reply
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
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1 reply
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
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1 reply
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
0 votes
1 reply
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Comment: C: How to do pca plot from .eigenval and .eigenvec files from Plink in R.
written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
13 replies
11K views
How to do pca plot from .eigenval and .eigenvec files from Plink in R.
r snp
updated by Devon Ryan Devon Ryan • written by amitgourav.ghosh12 amitgourav.ghosh12
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Comment: C: Use plink to extract data using common SNPs and merge this into one file
written by amitgourav.ghosh12 amitgourav.ghosh12
1 vote
1 reply
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Comment: C: Use plink to extract data using common SNPs and merge this into one file
written by amitgourav.ghosh12 amitgourav.ghosh12
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