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replies
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Answer:
A: rna-seq expression analysis among several nonmodel species (Next step?)
5.4 years ago by
Hussain Ather
▴ 990
2
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0
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5.7k
views
Answer:
A: Generating pileup from .bam file
6.0 years ago by
Hussain Ather
▴ 990
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1.7k
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Answer:
A: Differential Expression from Quantile-Norm Data
6.0 years ago by
Hussain Ather
▴ 990
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1
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4.5k
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Answer:
A: Differential ChIP-Seq Analysis
6.0 years ago by
Hussain Ather
▴ 990
1
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1
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2.5k
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Answer:
A: How to do correlation analyses between RNAseq and ChIPseq library?
6.0 years ago by
Hussain Ather
▴ 990
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Answer:
A: Using MACS2 for peak calling
6.0 years ago by
Hussain Ather
▴ 990
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0
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Answer:
A: How to analyze the expression of a single gene in microarray data?
6.0 years ago by
Hussain Ather
▴ 990
2
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Answer:
A: [Opinion] - What alignment software do you use?
6.1 years ago by
Hussain Ather
▴ 990
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Answer:
A: The relationship between DNA sequence divergence and recombination rates?
6.1 years ago by
Hussain Ather
▴ 990
4
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Answer:
A: Question: How to generate a count matrix with featurecounts
6.1 years ago by
Hussain Ather
▴ 990
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Answer:
A: Is it OK doing Principal component analysis (PCA) analysis just with high varian
6.1 years ago by
Hussain Ather
▴ 990
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1.8k
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Answer:
A: Is there an available tool to visualize multiple "types" of ChIP-seq peaks on a
6.1 years ago by
Hussain Ather
▴ 990
3
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3.0k
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Answer:
A: Cufflinks and StringTie
6.1 years ago by
Hussain Ather
▴ 990
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0
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1.3k
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Answer:
A: how to determine the gene involved in antibiotic resistance?
6.1 years ago by
Hussain Ather
▴ 990
1
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1
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12k
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Answer:
A: Modern software for whole genome alignment visualization
6.2 years ago by
Hussain Ather
▴ 990
1
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0
replies
1.4k
views
Answer:
A: Packages/modules for CNV, Indels, SNPs analysis
6.3 years ago by
Hussain Ather
▴ 990
1
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0
replies
2.9k
views
Answer:
A: opensource grafical user interface for filtering millions of annotated variant
6.3 years ago by
Hussain Ather
▴ 990
0
votes
1
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1.5k
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Answer:
A: Extracting Indels from two aligned DNA sequences
6.3 years ago by
Hussain Ather
▴ 990
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0
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1.5k
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Answer:
A: The Most Appropriate Statistical Test
6.3 years ago by
Hussain Ather
▴ 990
0
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2.9k
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Answer:
A: Assessing mapping quality from BAM files
6.3 years ago by
Hussain Ather
▴ 990
0
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1
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1.3k
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Answer:
A: Machine Learning/Deep Learning approaches to integrate genotype and annotation i
6.3 years ago by
Hussain Ather
▴ 990
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votes
0
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1.1k
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Answer:
A: Is there a database of proteins and their functional residues?
6.3 years ago by
Hussain Ather
▴ 990
1
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0
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2.3k
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Answer:
A: Annotation of taxonomy information in phylogeny tree
6.3 years ago by
Hussain Ather
▴ 990
0
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1
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1.7k
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Answer:
A: Quantifying mRNA level
6.3 years ago by
Hussain Ather
▴ 990
0
votes
0
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2.3k
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Answer:
A: Downloading data from HMPDACC.
6.3 years ago by
Hussain Ather
▴ 990
1
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0
replies
1.3k
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Answer:
A: Differential gene expression anaylsis -Ballgown
6.3 years ago by
Hussain Ather
▴ 990
0
votes
0
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2.0k
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Answer:
A: No peaks present in track when opening a .bedGraph file on IGV
6.3 years ago by
Hussain Ather
▴ 990
0
votes
1
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1.9k
views
Answer:
A: What shall I do with this RNA-seq data that have no replicates?
6.3 years ago by
Hussain Ather
▴ 990
1
vote
1
reply
2.0k
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Answer:
A: Issue with DEXSeq installation
6.3 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
2.8k
views
Answer:
A: rpkm and raw count
6.3 years ago by
Hussain Ather
▴ 990
1
vote
1
reply
2.3k
views
Answer:
A: Is anybody know why the StarBase website (http://starbase.sysu.edu.cn/) is not a
6.3 years ago by
Hussain Ather
▴ 990
1
vote
0
replies
5.5k
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Answer:
A: Does STAR give the reads that were mapped at intergenic regions? How can I get t
6.3 years ago by
Hussain Ather
▴ 990
3
votes
1
reply
1.0k
views
Answer:
A: add same string to the certain lines in python
6.3 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
1.5k
views
Answer:
A: What is my total number of genes in a hypergeometic distribution test?
6.3 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
1.4k
views
Answer:
A: How to detect insertion and deletion errors from BWA
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
1.4k
views
Answer:
A: Patterns within groups with RNA-seq
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
4.5k
views
Answer:
A: how can i plot a heatmap in shiny from a user input file
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
3.1k
views
Answer:
A: Names are not identical in mapping file and the otu file.
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
1.5k
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Answer:
A: Plant genes interaction pathway tool
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
2.5k
views
Answer:
A: Filtering Fasta sequences by length (only one must prevail)
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
10k
views
Answer:
A: Add annotation color bar to ggplot or ggvis barplot
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
1.7k
views
Answer:
A: File processing, arranging columns
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
4.9k
views
Answer:
A: Meaning of the Output from BBMap
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
1.8k
views
Answer:
A: Plotting linkage equilibrium results
6.4 years ago by
Hussain Ather
▴ 990
1
vote
0
replies
1.4k
views
Answer:
A: Identify trans-regulatory regions
6.4 years ago by
Hussain Ather
▴ 990
4
votes
0
replies
4.7k
views
Answer:
A: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 201
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
2.4k
views
Answer:
A: IceLogo Plots for Python or R
6.4 years ago by
Hussain Ather
▴ 990
0
votes
1
reply
1.6k
views
Answer:
A: How to command python to continue beyond the loop?
6.4 years ago by
Hussain Ather
▴ 990
1
vote
2
replies
3.6k
views
Answer:
A: Average size and amount of Enhancer and Promoters ?
6.4 years ago by
Hussain Ather
▴ 990
0
votes
0
replies
1.4k
views
Answer:
A: Is there any career oriented short term online courses available after post grad
6.4 years ago by
Hussain Ather
▴ 990
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